Pedobacter sp. KBS0701: FFJ24_005385
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Entry
FFJ24_005385 CDS
T06361
Name
(GenBank) glycoside hydrolase family 2 protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek00052
Galactose metabolism
pek00511
Other glycan degradation
pek00600
Sphingolipid metabolism
pek01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
FFJ24_005385
09103 Lipid metabolism
00600 Sphingolipid metabolism
FFJ24_005385
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
FFJ24_005385
Enzymes [BR:
pek01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
FFJ24_005385
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Glyco_hydro_2_C
Glyco_hydro_2_N
DUF4982
Glyco_hydro_2
BetaGal_ABD2
BetaGal_gal-bd
Invasin_D3
MIOS_WD40
Motif
Other DBs
NCBI-ProteinID:
QDW24283
LinkDB
All DBs
Position
complement(1351982..1354402)
Genome browser
AA seq
806 aa
AA seq
DB search
MKKLFYLFILISLSPALHAQSGRLVLDFDQNWTFNLGDVPNGQNVDFNDAGWRKLNLPHD
WSIEGEFKKENPATVEGGALPGGIGWYRKSFTVPQTDKDKLIYIAFDGVYQKSDVWINGH
HLGYRPNGYISFRYELTPYLNYGGKNVIAVKADNSLQPNSRWYSGSGIYRNVWLIRTNKI
AVNHWGTFVTTPKVSASHADVNLSVSIKNAAGNTKLATVVSSIYANGKVVASKTLNGVNL
KDTVTTVSQNFGVNNPVLWSVNKPFLYKVQTKILVNNVVVDQYETPLGIRYFNFDIDKGF
SLNGVYMKINGVCQHHDLGALGTAFNVHALERQFKILKEMGVNAIRTSHNPPAPAFLDLA
DRMGLIIMDEAFDVWQIHKRPQFDSHLFFNEWHKRDLTDQILRDRNHPSVMIWSIGNEIP
EQRDTSATRIARELAGIIHKLDTTRPITTGNNEPGPGNKIVESGAVDLLGYNYHNDKLAT
FQKDYPGKKFIGTETASALESRGVYNTSPDTIKRWPGGGVVNGKKVRWTMNADNTVNAYD
NISAPWGHTHEETWKIYKKYAFLSGQFIWTGFDYIGEPWPYQWPSRSSYFGIVDLAGFPK
DVYYMYQGEWTNKTVLHLLPHWNWEAGKVVDVWAYYSNADEVELFLNGKSLGTKSKQGDD
LHIAWKVNYEPGTLKAISRKNGKVVLTTEVKTAGPPARIELSADRSIIRSNDHDLSFITV
KIVDKNGIMVPNADNDVKFKLSGADSFLAGVDNGSQTSHESFKADHRKAFNGLALAIIGA
KNKPGKVIITATADGLTSASLPITIK
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattattttacttgtttatcctgatcagtttatcacctgctttgcatgcgcaa
agcggacgattggttttggattttgatcaaaactggacctttaacctgggcgacgtacca
aacggccaaaatgttgattttaatgatgccggctggcgaaaattaaatttacctcatgac
tggagcatagagggagaatttaaaaaagaaaaccccgctactgtggaaggcggcgcttta
ccaggcggtataggctggtaccgtaaaagctttaccgttccgcaaactgataaagacaaa
ttaatctatattgcttttgacggtgtttatcaaaaaagcgatgtgtggataaacggccat
catttaggttacagaccaaacggttatatcagtttcagatatgaacttacgccatattta
aattatggcggtaaaaatgtgatcgctgtaaaggctgataattctttacagccaaattcc
cgctggtattccggttcgggcatttaccgcaatgtttggctgatacgcaccaacaaaatt
gccgttaaccactggggtacttttgtaaccacaccaaaggtaagcgccagccatgccgat
gttaacctgagcgttagcataaaaaacgcggcaggcaatactaaacttgctactgttgtc
agcagcatttatgccaatggtaaagtagtagcaagcaaaacccttaacggcgttaattta
aaggatacggttactactgtaagccaaaatttcggtgttaataacccggtattatggtcg
gttaacaaaccgttcctgtataaagtacaaactaaaatattggtgaataatgtagtggtt
gatcagtatgaaacaccgcttggtatccgttatttcaattttgatatagataaaggtttc
agcctgaacggtgtttacatgaaaataaatggcgtttgccaacaccatgacctgggcgcg
ctgggcactgcatttaatgtgcatgcgctggaaaggcagtttaaaatattaaaggaaatg
ggcgttaatgcgatacgcacctcccacaacccacccgcaccagcgtttttagaccttgca
gaccgcatgggcctgattattatggacgaagcatttgacgtatggcagattcataagagg
cctcagttcgattctcatcttttctttaatgaatggcacaaacgcgacctgaccgatcag
atactgcgcgacaggaatcacccatcggtgatgatatggagtattggaaatgaaataccc
gagcaaagagataccagtgcgacacgtatagcccgtgagcttgccggtatcatccacaaa
ctggataccacaaggccaatcactaccggcaataatgaacccggccctggcaataaaatt
gttgaatcaggcgctgttgacttgttaggctacaattaccataacgataaactggccact
ttccagaaggactaccccggcaaaaaattcattggtaccgaaactgcttcggcgctggaa
agccgcggtgtttataatacttcgcccgataccattaaacgatggccgggaggcggggta
gttaatggtaaaaaggtaagatggaccatgaatgccgataataccgttaacgcttatgat
aatatttcggcaccctggggtcatacccacgaggaaacctggaaaatatataaaaaatat
gcttttctgtccggccagttcatctggaccgggttcgattatataggcgaaccatggcct
taccaatggccatcccgcagttcatacttcgggatagtagatctggcgggattccctaag
gatgtttattatatgtaccagggtgaatggaccaataaaacagtgctccacttattacca
cactggaactgggaagctggtaaagtagttgatgtttgggcctattacagtaatgccgat
gaagttgaactgtttttgaacggcaaatcattaggtacaaaatcaaaacagggcgacgat
ctgcacattgcctggaaagtaaactatgagccgggtaccttaaaagccatatcgcgcaaa
aatggcaaagtggtgttaactaccgaagttaaaactgcaggtccacctgccaggatagaa
ttaagtgcagacaggagcatcatacgttcaaacgatcatgatctttcttttatcacggtt
aaaattgtagataagaatggcataatggtcccgaatgctgataatgatgtcaaattcaaa
ttatcaggagcggatagcttcctggcaggtgttgataatggaagccaaaccagccacgaa
tcgttcaaagccgatcatcgtaaagcattcaatggcttggccctggcaattattggtgct
aaaaataaaccaggtaaagtaatcataacagcaacagcagatggcttaacttctgcatca
ttgccaattactatcaaataa
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