KEGG   Pedobacter sp. KBS0701: FFJ24_011305
Entry
FFJ24_011305      CDS       T06361                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pek  Pedobacter sp. KBS0701
Pathway
pek00740  Riboflavin metabolism
pek01100  Metabolic pathways
pek01110  Biosynthesis of secondary metabolites
pek01240  Biosynthesis of cofactors
pek02024  Quorum sensing
Module
pek_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pek00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    FFJ24_011305 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FFJ24_011305 (ribD)
Enzymes [BR:pek01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     FFJ24_011305 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     FFJ24_011305 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD APOBEC_N
Other DBs
NCBI-ProteinID: QDW25366
LinkDB
Position
2818859..2819914
AA seq 351 aa
MSDEFYIKRCLELAILSIGNVSPNPMVGCVIVLNDKIIGEGYHQQYGKAHAEPNAVKAVF
DQYGDEAEAMLKQATAYVSLEPCAHFGKTPPCADLFVKHQIKKVVIGNRDPFSSVDGKGI
EKLKNAGIEVLSGVLDDECRYLNRRFFTRIQQQRPYIILKWAETANGYFATKDGHQKWIS
GALTKRLAHQWRTEEDAILIGKQTAIMDNPQLTSREWPGKNPIRLIIDKNLQVPLSNHIF
NAAAKTIIFNEIKTDVVDNIHYIQMEDMHFYLAQKIAFQLYLMDIQSVIIEGGANILNQF
LSTNLWDEARIITSSNSWTEGVPSPTINGNLKEQIQIGNDKLSIYINDINK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgagcgatgaattctatattaaacgctgtttggagttagccattttaagtattggaaac
gtaagtccaaacccaatggtaggctgtgttattgttttaaacgataaaatcatcggcgaa
ggttatcatcagcaatacggaaaagcacatgccgaaccaaatgcggttaaagctgtattt
gatcaatatggagatgaggctgaggctatgttaaaacaggcaacagcttatgtgagtcta
gagccctgtgcacatttcggcaaaacccctccctgcgccgacctgtttgtgaaacaccag
atcaaaaaagtggttattggtaatagagaccctttttcaagcgttgatggcaaaggcatc
gaaaagcttaaaaatgcgggaattgaagtgctaagtggagttttagacgatgaatgccgt
taccttaacagaagatttttcaccagaatacaacagcaaaggccttacatcattttaaaa
tgggccgaaactgcaaatggttattttgcaactaaagatggtcaccaaaagtggatcagt
ggagctttaaccaaacgattggcacaccagtggcgaactgaagaagatgccattttgatc
ggaaaacaaaccgctattatggacaatccgcagttaacttcacgagaatggccgggtaaa
aaccccattcgtttgataatcgataaaaaccttcaggtgccgttatccaatcacattttc
aatgcagcagccaaaaccatcatatttaatgaaattaaaactgatgtagtcgacaatatc
cattatatccaaatggaagatatgcatttttacctggcacaaaagattgcgtttcagctt
tatttgatggacatacaatcggtaattatcgagggtggtgcgaatattctaaatcagttt
ttatccactaacctttgggatgaagcgcgtatcatcacctcatcaaacagctggacggaa
ggtgttccttctcctaccataaacggaaatctgaaagaacaaattcagattggaaacgat
aaactctctatctacataaacgacataaataaatga

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