Pedobacter sp. PACM 27299: AQ505_03175
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Entry
AQ505_03175 CDS
T04140
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep00260
Glycine, serine and threonine metabolism
pep00630
Glyoxylate and dicarboxylate metabolism
pep00785
Lipoic acid metabolism
pep01100
Metabolic pathways
pep01110
Biosynthesis of secondary metabolites
pep01200
Carbon metabolism
Module
pep_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AQ505_03175
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AQ505_03175
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AQ505_03175
Enzymes [BR:
pep01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
AQ505_03175
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ALL04582
UniProt:
A0A0P0NCV0
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All DBs
Position
complement(757503..760382)
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AA seq
959 aa
AA seq
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MSLNIHYKEDFKDRHIAPNTEDTNAMLDTLGLGSVDELIEQTVPQSIRLKQPLNLPRAKS
EKDYLSSLKKTASLNKVFKSYIGQGYYDTTTPGVILRNVMENPGWYTQYTPYQAEIAQGR
LQALLNFQTLVIDLTGMEIANASLLDEGTAAAEAMFMQFSLRKNSNAKKFFVSELIFPQT
IDILKTRANPFGIELVIGDHQTVELNEEFFGAIIQYPAGNGEVFDYTGFANTAHGVNVKV
TVIADLLSLTLLTPPGEWGADVVVGTTQRFGVPMGFGGPHAAYFATKDEYKRSIPGRIIG
VTIDSNNNYALRMALQTREQHIRRDKATSNICTAQALLAIMASFYAVYHGPKGLKLIAER
THGLTVTLAESLEKAGYTQLNKSYFDTIQLDLGHLVDSIHRECVDNEINLNYNGSVVTIS
LDETTDLEDVKLLVKIFAKVKGIAADSVEMSEENPATVIPTALQRTSAYLTHPLFNSHHS
EHEMLRYIKSLEAKDLSLCHSMIALGSCTMKLNATTEMIPVTWPEFGRIHPFAPADQVAG
YYTVFNELDKWLSEITGFAAMSLQPNSGAQGEYAGLMVIRAYHQDRGDHHRNVALIPSSA
HGTNPASAAMAGMKIIIVKSLENGNIDVADLKIKAEENKENLSCLMVTYPSTHGVFEESI
IDICNIIHENGGQVYMDGANMNAQVGLTSPGNIGADVCHLNLHKTFCIPHGGGGPGMGPI
GVAKHLVPYLPAHAVVDINKEKSIPAVSSAPWGSASILVISHAYIAMMGGDGLMNATKNA
ILNANYMKARLEQHYPVLYSGANGRCAHEMILDCRGFKNYGIEVVDIAKRLMDYGFHAPT
VSFPVAGTLMVEPTESEPKHELDRFCDALIAIRKEVTAVENGQLDKTDNPLKNAPHTATI
VTADEWNHGYSRQTAAFPLPYVAAFKFWPSVGRVNDSFGDRSLVCACPPIESYMEEETV
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaaatattcattacaaagaagactttaaagatcgtcacattgctcctaataca
gaggataccaatgccatgttagacacccttggtttgggttctgttgacgagttaatagaa
caaacggttcctcaatcgatccggttaaaacagccattaaacctgccaagggcgaaatct
gaaaaggattacctaagcagcttaaagaaaactgcttccttaaacaaagtatttaaatct
tatatcggtcagggatattatgacaccactaccccaggagtaatcttgcgtaacgtgatg
gaaaatccaggatggtatactcaatatacgccttaccaggcagagatcgcacaaggtcgc
ttacaggccctgttaaatttccagactttagtaatcgaccttacaggtatggaaatcgca
aatgcttctctattggatgaaggtactgctgctgctgaagcgatgttcatgcaattcagc
ttgcgcaaaaactcaaatgcgaagaaattcttcgtttcagaattgatcttcccacaaaca
attgatattttaaaaacccgtgccaatccttttggaattgaattagtgatcggcgatcac
caaacggttgaactgaatgaagaattcttcggtgcaatcattcaatacccagctggtaat
ggtgaggttttcgactataccggtttcgctaatactgctcatggtgtaaatgtaaaagtg
accgtaattgcggatcttttaagcttaaccttattgacgcctccaggtgaatggggtgct
gatgtcgtggtaggtaccactcagcgttttggtgtaccgatgggctttggtggtcctcat
gctgcttatttcgcgactaaagatgagtacaaacgctctattccaggacgtatcatcggg
gtaacgatcgacagcaataacaactacgccttacgtatggctttgcaaaccagggaacag
catatccgtagagataaagcgacttccaacatctgtactgcacaagcgttattagcgatt
atggctagtttctacgcagtttatcacggtccgaaaggattaaaactgatcgcagaacgt
acgcatggattgacagtaactttagctgaatcgttagagaaagcgggttatacacaattg
aataaatcttactttgacactattcagttagacttaggtcaccttgttgattctatccat
agagaatgtgtagacaatgagatcaacttaaactacaatggcagcgtagtgaccatctct
ttagatgagactacagacctggaagatgtgaagttattggtgaaaatctttgcgaaagta
aaaggtatcgctgcggatagcgttgaaatgtctgaagaaaatcctgcaacagtgattcca
actgctttgcaacgtacttctgcttacttaacacacccactattcaactcgcaccattca
gagcatgaaatgctgcgttatattaaatcattagaagcaaaagacctttctctttgtcac
tcgatgatcgctttaggttcatgtactatgaaactaaatgcaactactgaaatgattccg
gtaacctggccagaattcggtagaatccacccatttgctccggcagatcaggttgcgggt
tactatactgttttcaatgagctagacaaatggttgagtgaaatcactggatttgcagcc
atgagcttacagccaaactctggtgctcaaggtgaatatgcaggtttaatggtgatcaga
gcttaccatcaggatcgcggtgaccatcaccgtaatgtggctttaattccttcttctgca
catggaaccaatccggcttctgcagcaatggctggaatgaaaatcatcatcgtgaaatct
ttggaaaacggtaatattgacgttgccgatttaaagatcaaagcagaagagaacaaagaa
aacctttcttgcttaatggtgacttacccatctacacatggtgtatttgaggaaagcatt
atcgatatctgtaacatcatccatgaaaatggcggacaagtttacatggatggcgcaaac
atgaatgctcaggtaggattaaccagcccaggtaacattggtgctgacgtttgtcacctt
aatttacataaaactttctgtatccctcacggtggtggtggtcctggtatgggtccaatc
ggtgtagctaaacacctggttccttaccttccagctcatgcagtggtggatatcaacaaa
gaaaaatctatccctgcagtatcttctgcgccatggggttcagcttcgatcttagtgatc
tctcatgcatatatcgcaatgatgggtggcgacggattaatgaatgcaacgaaaaatgca
attcttaacgccaactatatgaaagcgcgtttagagcagcattacccagtattatactcc
ggtgcaaatggacgttgtgcacacgaaatgatcctggattgcagaggcttcaaaaactac
ggtattgaggtagttgacattgcaaaacgtttaatggattatggtttccatgccccgaca
gtatctttcccagtagcgggaacgctaatggtagaacctactgaaagtgagccgaaacat
gagttagacagattctgcgatgctttaattgcgatcagaaaagaagtaactgcagtagaa
aatggtcaattagacaaaaccgataacccattgaaaaatgcacctcataccgctacaatt
gtaacggctgatgaatggaatcatggttacagcagacaaacagctgctttcccacttcct
tatgttgcagctttcaaattctggccttcagtaggtagagtaaatgattcctttggcgat
aggtcattggtttgcgcttgcccgccgattgaaagttacatggaagaagaaactgtttaa
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