Pantoea eucrina: LAC65_15585
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Entry
LAC65_15585 CDS
T07862
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
per
Pantoea eucrina
Pathway
per00540
Lipopolysaccharide biosynthesis
per01100
Metabolic pathways
per01250
Biosynthesis of nucleotide sugars
Module
per_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
per00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
LAC65_15585 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
per01005
]
LAC65_15585 (rfaD)
Enzymes [BR:
per01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LAC65_15585 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
per01005
]
Core region
LAC65_15585 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
DUF6716
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UBB13180
LinkDB
All DBs
Position
3275868..3276800
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGMIGSNIVKALNDRGHSDILVVDNLKDGTKFVNLADLDIADYMDKEEFLSYI
MSGEDLGPIEAVFHQGACSATTEWDGKYMMDNNYQYSKDLLHFCLEREIPFLYASSAATY
GGRNENFIEERQYEEPLNVYGYSKMLFDHYVRQILPEADSPVCGFRYFNVYGPREGHKGS
MASVAFHLNTQISNGENPKLFEGSDSFRRDFIHVDDVVAVNLWCWENGVSGIYNCGTGRA
ESFQEVADAVLKFHQQGQIEYIPFPDKLKGRYQAFTQADLTKLREAGYDKPFKTVAQGVG
EYMAWLNRNA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttaccggcggcgctggcatgattggcagcaacatcgttaaagcgcttaac
gatcgcggtcatagcgacattctggtcgtggataacctgaaagatggcaccaaattcgtc
aatctggcggatctggatatcgctgattatatggataaagaggagtttctctcttacatc
atgtcaggcgaagatctggggccgattgaagcggtattccatcaaggtgcctgttccgcc
accaccgagtgggatggcaagtacatgatggataacaactatcagtactctaaagatctg
ctgcatttctgccttgagcgcgagatcccgtttctctacgcctcctctgccgcgacctat
ggtggccgcaatgagaactttatcgaagaacgtcagtatgaagagccgctgaacgtctac
ggctattcaaaaatgctgttcgatcactacgtgcgtcagattctgcctgaagcggattcg
ccggtgtgcggtttccgctatttcaatgtgtatggtccgcgcgaagggcacaaaggcagt
atggccagcgtggcgtttcatctgaatacgcaaatcagcaacggtgagaaccctaagctg
tttgaaggcagcgacagcttccgccgtgattttatccatgtagatgatgttgtggctgta
aacctgtggtgctgggagaatggcgtatccggtatctataactgcggcaccggacgcgcg
gaatcgttccaggaagtggctgatgccgtgcttaaattccatcagcagggccagattgag
tacattcctttcccggataaactcaaaggacgctatcaggcatttacccaggccgatctg
acaaaactgcgtgaagcgggctatgacaagccatttaaaactgtcgcacagggcgtgggc
gagtacatggcctggctgaatcgcaacgcataa
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