Populus euphratica (Euphrates poplar): 105122731
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Entry
105122731 CDS
T05872
Name
(RefSeq) DNA-directed RNA polymerase I subunit rpa1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105122731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105122731
Enzymes [BR:
peu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105122731
Transcription machinery [BR:
peu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105122731
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
105122731
NCBI-ProteinID:
XP_011020318
LinkDB
All DBs
Position
Unknown
AA seq
1699 aa
AA seq
DB search
MASLEGATVSVDSVAFSFLTDEEVHKHSFVKITSARLLDTLDKPVPGGLYDPAMGPLGDE
PCKTCGQRSTNCTGHCGHIDLISPVYNPLLFNFLHKLLQRTCFFCFHFRADSNQVEKFVS
QLELIIKGDVVGAKRLDSFSPIEASLPEDSDGSSESCSTIHSGAPHPNNEQSKQSEWTSL
QLSEAMSILNNFLKLESKKCKNCSASNPNIRKPTFGWFHWAGLSNAAIRSNLIKQQTIEG
PFGGAFEELIDAEDATKSPNNKESATNRNLKEHQKLQHQFTSQKDALSSQLLPSEAMDIL
KLLWKNEAGLCSLMSDIQQQGVGKKKAGHSMFFLNTVLVPPIKFRPPTKGGDSVMEHPLS
VLLSKVLELNGSLADAHRSNDFPLIARRWLELQQSINVLFDSNTAKGQKDVISGICQILE
KKEGMFRQKMMGKRVNYACRSVISPDPYLDVNEIGVPPCFAVKLTYPERVTPWNVAKLRN
AVINGPESHPGATHYVDKLSTTKLPPNRKMRVSVARKLSGRSFDYEYEGKIVYRHLQDGD
IVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRA
EGYNIVNANNQYVRPSNGEPIRSLIQDHIISAVLLTKKDTFLTEDEVYQLLYSSGVSNAR
PTSFSGRAGRKVIFLSYEDEIETLDPAIRKPIYLWSGKQLITAVLNHITRGHPPFTVEKG
GKLSYDFFKSKIKNGKSSNGEKVGVSKPMKEKESGKVNPKEKQLEDDKMIIFRNVLVQGV
IDKAQFGEYGLVHTVQELFGAKAAGTLLSVFSRLFTAYLQMHGFTCGVDDLLITKIKDDE
RKKQLENCEKCGEQIHRKFIGIKDENIKIDPLELQSNIEKTIRSDGESALTYLDRQMTNE
LNSKTSSGVINELLSEGLLKPSGKNCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVP
RMVSGKTLPCFHPWDWAARAGGYIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY
LQRCLIKNLECLRIGYDHTVRDADGSIVQFYYGEDGVDVHQTGFIAKFEALAANREIIYE
KSDELGTFNAYISELPEALKEKAEIFLRNIAKEQSSLHDYTKDRSSNLVEHDFYKLLKQK
FFLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASADI
KTPIMTCPLQEGRTKEDAERLSDKLKKVTVADIIESMEVSVMPFAVQNDGICRIYKLKMK
LYTPAHYPQHADISVENWEETLEVLFVRELEDAIQNHLVLLSKISGIKNFLKESHSGTPI
EAEEDVSGNISHEGENDDDSDDEGEEADDLGLDVQKRKQQVTDEMDYDDGSEGLLNEDEG
DLSGSQAPSGSESDTEPADKESEISNTGMVDNDSEYFEKPSHLGNYSKPKSRKKTSESSS
QVEMHSKLKSTEKKKQKAKGKKVRSKLVKKDFDRSIFVEAKGLHFEIHLKFTNEPHILLA
EIAQKTAKKVCIQNPGKVQRCQVTDCKENQVIYYGKDPKRRIDIEPGEKQKIPALHTIGV
DFNTFWKMQDHLDVRYMYSNSIHGMLKAYGVEAARETIIREIKHVFNSYGISVNTRHLSL
IADYMTHTGEYRPMSRIGGISESISPLSKMSFETASKFIVEATLHREVDNLEAPSARVCL
GLPVKMGTGSFDLMQKLEI
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atggcttccctagagggtgcaactgtgtcagttgattcggtagcgtttagcttcttaacg
gatgaagaggttcataagcatagttttgtaaagattaccagcgcgagactgcttgatact
ttggacaaacctgtgcctggtggattatatgacccagcaatggggcctctaggggatgag
ccttgcaaaacatgcggtcaacgttcaactaattgcacaggtcattgtggccatatagat
ctgattagtccagtttacaatcctctgctctttaattttcttcacaaacttctgcaaaga
acctgtttcttctgctttcattttagagcagatagcaaccaggttgagaaatttgtttct
cagttggaactcatcataaaaggtgatgttgttggggctaaaaggttggattctttctcg
ccaattgaagcctcattgccagaagacagtgatggcagcagtgaatcctgttctacaatt
cattctggagcaccgcatccaaacaatgagcagtcaaagcagagcgaatggacctccctt
cagttatctgaagcaatgtctatcttaaataattttctgaagttggaatcaaagaagtgc
aagaactgttcagcatccaatcctaatattcggaagcctacttttggttggtttcattgg
gcaggtttatcaaatgcagctattagatcaaatctgattaagcagcagacaattgaaggg
ccatttgggggtgcatttgaagagttgatagatgcagaagatgcaaccaaatctcctaat
aacaaagagtctgccacaaacaggaatttgaaagaacaccagaaattgcaacatcagttc
actagccagaaagatgctttgtcctcgcagttattaccatcagaagcgatggatatttta
aagcttttgtggaaaaatgaagctggactctgctcattgatgagtgacattcagcagcaa
ggagttgggaagaaaaaggcaggacattctatgttctttctgaatactgttttagtgcct
ccaatcaaattcaggcctccgaccaagggaggtgactctgtgatggaacatcctctatct
gttttgctgagcaaggtgctggaattgaatggatctttggcagatgcgcatagaagcaat
gatttcccattaatagctaggcggtggttggaacttcagcagtctataaatgtcttgttt
gattccaatactgccaagggtcagaaggatgtgatttctgggatatgccagatacttgag
aagaaggagggtatgtttcggcagaaaatgatgggaaagagggttaattatgcatgccgg
tctgttatttccccagatccttatttagatgtcaacgaaattggagttcctccatgcttt
gcagtgaagttaacatatcctgagagagtgacaccctggaatgttgccaaattgagaaat
gctgtaatcaatggccctgaaagtcaccctggagctacgcactatgtggataagctgtct
acgactaagcttccaccgaatcgaaaaatgcgtgtttctgtagcaaggaaattatctggg
aggagttttgattatgaatatgaagggaaaattgtatatcgccatttgcaagatggagat
attgtgcttgtcaatcgacagcctacacttcacaaaccaagtataatggcacatgtagtt
cgtgtattgaagggggagaagacactacgcatgcactatgcaaattgcagtacatacaat
gctgattttgatggtgatgaaatgaatgttcatttcccacaagatgaagtttctcgagct
gaaggttacaacattgttaatgcaaataatcaatatgtcaggccttccaatggcgaacca
attagatccttgattcaggatcatattattagtgctgtgcttttaacaaagaaggacact
tttttgaccgaggatgaagtttatcaactgctttatagttctggtgtgtcaaatgctcgt
ccaacatcttttagtggcagagctggccgaaaagttatattcttaagttatgaagatgag
attgaaacccttgatcctgcaataaggaaacccatttatctgtggtcaggaaaacagttg
attaccgctgtgttgaatcacattacaaggggccatccaccattcactgttgagaaaggt
gggaagctctcgtatgatttttttaagagtaaaattaagaatggcaaatctagcaatgga
gaaaaagttggtgtaagcaaaccaatgaaggaaaaagagtctggcaaagtcaatccaaaa
gaaaagcagcttgaagatgataagatgattatctttaggaatgtattggtccaaggggtg
attgacaaggcccagtttggtgagtacggtttggtgcacacagttcaagaattgtttggt
gcaaaagcagctggcaccctgctctctgttttcagtcgattattcactgcttatttgcag
atgcatggattcacatgtggagttgatgatcttttgattacgaaaattaaagacgatgaa
aggaagaagcaacttgaaaactgtgaaaagtgtggggaacaaattcatcgtaaatttatc
ggaatcaaggatgagaacattaagatagatccattggaattacaatcaaatattgaaaaa
actatacgcagtgatggcgagtctgccttgacatatctggataggcagatgacaaatgaa
ctaaattccaaaacaagctcaggagtcatcaatgagctgttgtctgaagggttgctaaaa
ccctctggaaagaattgcatatcgcttatgactacatctggggctaaaggtagcaaggtc
aatttccaacagatatcttcttttctgggccaacaggagttggaaggtaaaagagttccc
cgaatggtttctggaaagaccttgccctgctttcatccatgggattgggcagcccgtgcc
ggaggctatattattgatcgttttctcaccggtctgcgtcctcaggaatattatttccat
tgcatggctggtcgtgaagggttggttgatacagctgtcaaaacatctcgcagtggatac
ctccaaagatgcctgattaaaaatcttgagtgcctcagaatcggctatgatcatacagtt
cgtgatgctgatggctcaattgttcaattttactatggagaagatggtgtggatgttcat
caaacaggctttattgctaaatttgaagccttggcagcgaatcgagaaataatatacgaa
aaaagtgatgagcttggcacatttaatgcttatatttcggaattgcctgaagctcttaaa
gaaaaagcagaaatattcctgcgtaatatcgcaaaggagcagagttctttacatgattac
acaaaggatcggagttctaatttagtggaacatgatttctataaattattgaagcaaaag
tttttcctgagtcttgcacaaccaggagaaccagttggtgtccttgctgctcagtctgta
ggagaaccatcaacacagatgacgctgaacactttccatctagctgggcgtggtgaaatg
aatgtaacccttggaattccacgtctccaagagattttgatgactgcttcagctgatatt
aagactccgattatgacctgccccttgcaggaagggagaactaaagaggatgctgagcgc
ctttctgataagttgaagaaggtcaccgtagccgatataattgagagcatggaagtatct
gtcatgccatttgctgttcagaatgacggcatttgcagaatttataagcttaaaatgaag
ctttatacaccagcgcactacccacaacatgctgatatatcagtagaaaattgggaagaa
acccttgaggtgttgtttgtgagagagttggaggatgctatacaaaatcatctggttttg
ctttctaaaattagtggcattaagaattttttgaaggaatcacattcagggacgccaatt
gaagcagaagaagatgtttctggcaacatatcacacgagggtgaaaacgatgatgatagt
gatgatgaaggggaagaggctgatgatctaggtttagatgtgcagaaaagaaaacagcaa
gttacagatgagatggattatgatgatggctctgaggggttactgaatgaagatgaaggg
gatttatcaggaagccaggctccatctggatctgaaagtgatactgaaccggctgataaa
gaaagtgagatcagtaacactggtatggttgacaatgacagtgaatattttgaaaagcca
tcacatcttggaaattactctaagccaaagtcaaggaagaaaacctcagaaagttcatca
caagttgaaatgcattctaagctaaagtcaacagaaaagaagaaacaaaaggccaaggga
aagaaagttagatcaaaattagttaaaaaggactttgatagatcaatctttgtggaagcc
aagggattgcactttgaaatccatcttaaattcaccaatgaacctcatattttactggcc
gagattgctcagaagacagccaagaaggtctgtatccagaatcccgggaaggttcaacgg
tgtcaagtgactgattgcaaagaaaatcaagtgatttactatgggaaagaccccaagaga
agaattgatattgaacctggggaaaaacaaaaaatcccagcgcttcatacaattggagtg
gacttcaatacattttggaaaatgcaagatcaccttgatgttaggtatatgtattcaaat
agcattcatggtatgttgaaagcttatggagtagaggccgctagagagacaatcattagg
gagataaagcacgtgttcaattcttatggaatatctgtcaatacacggcatttgtctctt
atagctgattatatgacccatactggtgagtaccgcccgatgagccgtattgggggcata
tcagagtcgatatcacctttaagtaaaatgtcttttgagacagcgtccaaattcatagtt
gaagccacattgcacagggaggtcgataatttggaagctccatctgctagggtttgtctt
ggattgccagtgaaaatgggtactggatcttttgatttgatgcagaaattggaaatttaa
DBGET
integrated database retrieval system
