Paraburkholderia edwinii: KZJ38_10230
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Entry
KZJ38_10230 CDS
T07588
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pew
Paraburkholderia edwinii
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pew03009
]
KZJ38_10230 (rimO)
Enzymes [BR:
pew01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KZJ38_10230 (rimO)
Ribosome biogenesis [BR:
pew03009
]
Prokaryotic type
ribosomal protein modification factors
KZJ38_10230 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QYD70622
LinkDB
All DBs
Position
1:2299631..2301031
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AA seq
466 aa
AA seq
DB search
MNANTNPTEPGNKPSATPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVV
NTCGFIDEAVQESLDAIGEALTENGKVIVTGCLGAKKSASGSGLIEEVHPKVLAVTGPHA
VGEVMQAVHSHLPKPHDPFVDLVPAAGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDL
VSRPVAEVMLEAENLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPIKTRMTDLVAAL
GELAAQYGAWVRLHYVYPYPSVDEVIPMMAEGPFKGHVLPYLDVPFQHAHPEVLKRMKRP
ANAEKVLERVRAWRDICPDLTIRSTFIAGFPGETEAQFETLLDFIREAELDRVGCFAYSP
VEGASANELDGALPDAVREERRARFMEVAEQVSAKRIARKVGKTLKVLVDEINADGGIGR
TAADAPEIDGVVYIAPTTKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgccaatacaaaccccacagagcccgggaataagccatcggcaacgccgaaggta
ggatttgtctccctcggctgcccgaaagccctggtcgattccgaacagatcattacgcaa
ctgcgcgccgaaggttacgagatctccggcacgtatgacggcgccgacctcgtcgtcgtc
aatacgtgcggttttatcgacgaagcggtgcaggaaagtctcgatgcgatcggcgaagcg
ctgaccgaaaacggcaaggtcatcgtgaccggctgtctcggcgcgaagaaaagcgcgagt
gggtcgggcctgatcgaggaagtgcacccgaaagtgctcgcggtaaccggtccgcatgcg
gtcggcgaggtgatgcaggcagtgcacagccacttgccgaagccgcacgatccgttcgtt
gatctcgtgcccgcggccggcgtgaagctcacgccacggcactatgcgtatctgaagatt
tccgaagggtgcaatcaccgttgcaccttctgcatcattccgtcgatgcgcggtgatctc
gtgtcgcgccccgtcgccgaggtgatgctcgaagcggaaaatctgttcaagtccggcgtc
aaggaactcctcgtgatttcgcaggacacgagcgcgtacggtgtcgacgtcaaataccgc
accggcttctggaacggcaagccgatcaagacgcgcatgacggatctcgtcgccgcgctc
ggtgaactcgccgcgcagtacggcgcatgggttcggctgcactacgtctatccgtacccg
agcgtcgacgaagtgattccgatgatggccgaagggccgttcaaaggccacgtgctgccg
tatctcgacgtgccgttccagcacgcgcatcccgaggtgttgaagcgcatgaagcgcccg
gccaatgcggagaaggtgcttgagcgcgtgcgcgcatggcgcgacatctgccccgatctg
acgatccgcagcacgtttatcgcgggctttccaggcgaaaccgaagcgcagttcgaaacg
ctgctcgactttatccgcgaggcggaactcgaccgcgtcggctgcttcgcctattcgccg
gtcgaaggcgcgagcgcgaacgaactcgacggtgcgctgcccgacgcggtgcgcgaggaa
cgccgcgcgcgctttatggaagtggccgagcaggtctccgcgaagcgcatcgcgcgcaag
gtcggcaagacgctgaaggtgctcgtcgacgaaatcaatgcagacggcggcatcggccgc
actgccgccgatgcgccggaaatcgacggcgtcgtctatatcgcgccgacgacgaaagcg
tcgaagcgctacaaggtcggcgatttcgtttcggtgaagatcacgggcgcggacggccac
gatctgtggggcgaggtctga
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integrated database retrieval system
