Pedobacter endophyticus: IZT61_08975
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Entry
IZT61_08975 CDS
T07452
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pex
Pedobacter endophyticus
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pex03009
]
IZT61_08975 (rimO)
Enzymes [BR:
pex01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
IZT61_08975 (rimO)
Ribosome biogenesis [BR:
pex03009
]
Prokaryotic type
ribosomal protein modification factors
IZT61_08975 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QPH41367
UniProt:
A0A7S9L2P1
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All DBs
Position
2266403..2267737
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AA seq
444 aa
AA seq
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MNTKIVRSKTAITQPKINVITLGCSKNIYDSEVLMGQLRGNNLNVVHEADSMGKDDIVVI
NTCGFIDNAKQESIDTILQFSELKDAGKIGKVVVTGCLSERYKPELESEITNVDAFFGTN
DLQNILHELGANYRHELIGERLLTTPSHFAYFKIAEGCNRPCSFCAIPLMRGKHMSKPME
ELVNEAKILAKNGTKELILIAQDLTYYGLDLYGTRKLDELMRRLSDVPGIEWIRLQYAYP
SGFPMEILDAMNERENICKYLDMPLQHITDNMLKSMRRGTTKQKTIDLVNQIRDKVPNIA
MRTTLICGYPGETQYDFEEMAAWVEETKFDRLGCFTYSHEEKTHAHTLIDDIPEEVKQQR
VDDIMEIQQGISFDINQGKVGQTFKVLVDKKEGDFFVGRTEFDSPEVDNEVLIDAATGYA
ANGSFVNVKIDRAEDFDLYGMIVK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaatactaaaatagtacgcagtaaaacagcaataacacaacccaaaatcaatgtaatc
acgctgggttgctcaaaaaacatttacgactcagaggttttgatggggcaattgcgtgga
aacaatttaaacgttgttcacgaagccgacagcatgggtaaagatgatattgttgtcata
aatacctgcggcttcatcgataatgccaagcaagaatctatcgacaccattcttcagttc
agcgagttaaaagatgctggaaagattggcaaagtagtagttacaggctgtttatcagaa
cgctataaacccgaattagaatcggagattaccaatgttgatgcctttttcggcacaaac
gatttacaaaatatattgcacgaactgggcgcaaactataggcatgagcttattggcgag
cgtttgctaactacaccgtcgcacttcgcctatttcaaaattgccgaaggctgtaaccgt
ccctgctcgttttgtgccattccgctaatgcgtggcaagcacatgagtaagccaatggaa
gagttggtgaacgaggcgaaaattctggccaaaaacggcaccaaagagctaattttaatt
gcgcaggatttaacgtattatggcctcgatctgtatggtacgcgtaagctcgatgagttg
atgcgtcgtttatctgatgttccgggcattgaatggattcgtttgcagtatgcttacccc
agtggtttcccaatggaaattttagatgctatgaacgagcgagaaaacatttgcaagtat
ttagacatgcctttgcaacacatcaccgataacatgttaaaatcgatgcgtcgtggcacc
accaagcaaaaaacaatagatttggttaatcagataagagataaggtgcctaacattgcc
atgcgtaccaccctgatttgcggttaccccggcgaaacccagtacgattttgaagagatg
gctgcctgggtagaggagacaaaattcgaccgcttaggctgttttacctattcgcacgaa
gagaaaacgcatgcgcatacattaattgatgatattccggaggaagttaaacaacaacgt
gttgacgacattatggaaattcaacaaggaatctcttttgatattaaccaaggaaaagta
ggccagacctttaaggtgttagttgataaaaaagaaggtgatttctttgtaggaagaacg
gaattcgattcaccagaggttgacaatgaagttttgatcgatgccgcaactggttacgcg
gcaaatggcagttttgtcaatgtgaaaatcgaccgggcagaagatttcgatctgtatgga
atgattgtaaaataa
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