Phascolarctobacterium faecium: PFJ30894_00387
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Entry
PFJ30894_00387 CDS
T05784
Symbol
ldc
Name
(GenBank) Lysine/ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pfac
Phascolarctobacterium faecium
Pathway
pfac00330
Arginine and proline metabolism
pfac00480
Glutathione metabolism
pfac01100
Metabolic pathways
pfac01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PFJ30894_00387 (ldc)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PFJ30894_00387 (ldc)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
PFJ30894_00387 (ldc)
Enzymes [BR:
pfac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
PFJ30894_00387 (ldc)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BBG62772
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All DBs
Position
complement(400624..401796)
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AA seq
390 aa
AA seq
DB search
MKKDIFFQLSQNAAERLAERFGTPLLVLSLEQIEKNYRFLKKHLPRVQLYYAIKANPHQR
ILELLRDLGSCFDVASDGEIRTLAAMGIDGERLIYANPIKTGGGLQACCDVGVHKMTFDS
ESEIVKMAQGCPGATVLLRIRIDNSSAHVDLNKKFGVGRERAVELLQAAQAAGLDAAGVC
FHVGSQTMSADPYLNALDLAREIFEEAAAAGMQLRILDIGGGFPIPEPKVRFNLKEMLKQ
INARLDEDFPNVEIWAEPGRFMCGTAVNLITSVIGVTERGGQPWYFLDDGLYGTFSGVIF
DQWDFKLISFKEGEEVEATFAGPSCDSLDIMFRGKLTVRQEVGDLLLVPSCGAYTSASAT
TFNGFSKANFIVWEDLKDEIEPQPQAAMVG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggacatcttttttcaacttagtcaaaatgctgcagaaaggctggcagagcgc
tttggaacgccgctgctggtactttctttagaacaaatagaaaagaactatcgctttttg
aaaaagcacttgccgcgtgtgcagctttactatgcgatcaaggccaatccgcatcagcgg
atcttggaactgctgcgtgacctgggttcctgctttgatgttgcttctgacggcgagatc
agaactctggcagcaatgggtattgacggcgagcgtctgatttacgccaatcctatcaaa
accggcggcggtctgcaggcctgctgtgacgtcggtgtacataaaatgacttttgacagc
gaaagtgaaatcgtaaaaatggcacagggctgccccggtgctacggtgcttctgcgtatc
cgtatcgacaattcttccgcacatgtagatttgaataaaaaattcggcgtaggccgcgaa
cgcgcagtagaactactgcaggcagcacaggctgccggtcttgacgccgccggcgtttgt
ttccatgtcggcagccagacgatgagcgccgatccatatctgaatgcgcttgatctggcc
cgcgagatttttgaagaagctgccgctgcagggatgcagctgcggatcttagatattggc
ggcggatttccgattcccgaacccaaggtgcgttttaatttaaaagaaatgcttaaacag
atcaacgcccgtctggacgaagattttcccaatgtagagatctgggcggaaccgggacgt
tttatgtgcggtacggctgtcaaccttattaccagcgtcatcggtgttactgaacgcggc
ggtcagccctggtatttccttgatgatggtttatacggaactttttccggcgttattttt
gaccagtgggactttaagctgatcagctttaaagaaggagaagaagtggaagccactttt
gccggtcccagctgtgattcgctggatatcatgttccgcggcaaactgactgtacgccag
gaggtaggcgatctgctgctggttccttcctgcggcgcttatacttcggcttcggcgacg
accttcaacggtttcagtaaagccaattttatcgtttgggaagatttaaaagacgaaatc
gagccgcagccgcaggctgctatggttggctga
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