Parabacteroides faecis: NXY11_21130
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Entry
NXY11_21130 CDS
T08643
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pfai
Parabacteroides faecis
Pathway
pfai03030
DNA replication
pfai03410
Base excision repair
pfai03420
Nucleotide excision repair
pfai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NXY11_21130 (polA)
03410 Base excision repair
NXY11_21130 (polA)
03420 Nucleotide excision repair
NXY11_21130 (polA)
03440 Homologous recombination
NXY11_21130 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfai03032
]
NXY11_21130 (polA)
03400 DNA repair and recombination proteins [BR:
pfai03400
]
NXY11_21130 (polA)
Enzymes [BR:
pfai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NXY11_21130 (polA)
DNA replication proteins [BR:
pfai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NXY11_21130 (polA)
DNA repair and recombination proteins [BR:
pfai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NXY11_21130 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NXY11_21130 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
HHH_5
RNase_H_2
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
UVQ45636
LinkDB
All DBs
Position
5287276..5290056
Genome browser
AA seq
926 aa
AA seq
DB search
MKLFLIDAYALIYRSYYAFLKNPRINSKGMNTSAIFGFINSLEDVLKRENPTHIAVAFDP
KGPTFRHEAYELYKAQREETPEVIRQSVPIIKDIIEAYNIPILEVPRYEADDVIGTVSKQ
AEKEGFEVYMMTPDKDYGQLVSEHIFMYRPKFGGDYEVMGVQEVLNKYSLTSVDQVIDLL
GLMGDSSDNIPGCPGVGEKTAQKLLDEFGSIENLLENTDKLKGSLQKKVSENAEQIRFSK
FLATIKTDVPIQFDAVKCVREKPNEARLTEIYTELEFRTFINKMAAEEKKPAPAPKVTKG
PVQGNLFDLFATEVPSVPKYSTLANLKTTPHNYITVDSEEERAKLGRFLLDQDFFAFDTE
TDGIDPLTAGLVGMSFSVKENEAWYVPVPADKEEAAKIVAHFSPALQNPKSQKIGQNIKF
DIMVLRKYDVRVAGPLFDTMIAHYLLNPELRHGMDYLAETYLKYKPVPISELIGPKGKNQ
LCMRDVPLSKIAEYAAEDADVTLKLKHFFAPELKKTGIESLFFDIEMPLIYVLAEMELTG
VKLDTVALKQSSEELTGALLKLEKEIYELAGTKFNINSSKQVGEILFERLKIEEKTKKTK
TGSYSTSEDVLEKLRSKHPVVDKLLEYRGLKKLLSTYIDALPELISPVTGKVHTSYNQTV
TATGRLSSTNPNLQNIPIRDELGREIRKAFIPDNADCTFFSADYSQIELRIMAHLSNDEH
MIEAFRSGADIHAATAAKIYGIPVEEVSSDMRRKAKTANFGIIYGISIFGLAERLNIPRA
ESKELIEGYFKSYPGIRDYMDESIRIAKEKGYVETIFKRKRYLPDINSHNAIVRGYAERN
AINAPIQGSAADIIKVAMVRIFNRFEAEDLKSKMILQVHDELNFNVCNDELEKVKQIVLE
EMEGAIKLQVPLIADCGEGVNWLEAH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaagctattccttatagacgcgtatgcactgatctatcggtcgtactacgcatttctt
aaaaatccgcggatcaactcgaaaggcatgaacacttctgccattttcgggtttatcaac
agtctggaagatgtgttgaaacgtgagaatccaacgcatattgccgttgctttcgatccg
aaaggcccgacattccgtcacgaagcatacgaattatataaggcacagcgggaagaaacc
ccggaagtgatccggcagtccgtccctattatcaaggacattatcgaagcatacaatatc
cccatactggaagtcccccgctacgaagccgacgatgtaatcggtaccgtttccaagcag
gcggagaaagaagggttcgaagtctatatgatgacaccggacaaagattacggacaactg
gtgtccgaacatatatttatgtaccgtcctaaattcggaggcgactacgaagtgatgggc
gtacaggaagtattgaataaatattcgctgacttcggtcgaccaggtgatcgaccttctt
ggactgatgggcgacagctccgataacattccgggttgtccgggtgtcggagaaaagaca
gcacagaaattactcgatgaattcggttctatcgaaaacctgctggagaataccgacaaa
ctgaaaggctccctccagaaaaaggtatcggagaatgccgaacagattcgtttctcaaaa
ttcctggctacgatcaagacagatgttcccatccagttcgatgccgttaaatgtgtccgg
gaaaaaccaaacgaagctcgtctgactgagatttacacggaattagaattcagaacattt
attaacaaaatggctgcagaggagaaaaagcccgctcctgcccccaaagtgacaaaaggg
cctgttcaaggcaatctctttgacttatttgcgaccgaggttccgagtgttccaaaatat
tcgactctcgcgaacttaaaaacgacccctcacaattacataaccgttgattctgaggaa
gaaagagccaaattaggccgttttttactggatcaggatttttttgcttttgacacggaa
accgatggcatcgacccattgacagccggattggtcggaatgtcgttctccgtaaaggaa
aacgaagcctggtatgtcccggttcctgccgataaggaagaagcggcaaaaatcgttgct
cacttctcccctgccctgcaaaacccgaaatcgcaaaaaataggacagaatataaaattc
gatataatggtccttcgcaaatacgatgtccgggtagccggtccgttgttcgacaccatg
atcgcccattacctgctcaaccccgagttgcgtcatgggatggactacctcgcggagacc
tatctcaaatataaaccggtccccatctcggagcttatcggtccgaagggaaagaaccag
ctatgcatgcgcgatgtcccgctcagtaaaatagccgagtatgccgccgaagatgctgat
gtcacattaaagctcaaacatttctttgcgcccgaactgaagaaaacagggatcgaatct
ttatttttcgacatcgagatgccattgatatatgtattggcagaaatggagttgacaggt
gtcaagctcgacacggtcgccttgaaacagtcatcggaagaactgaccggggcattactc
aaactggaaaaggagatctatgaactggcaggtaccaaattcaacatcaactccagcaag
caggtcggcgagatccttttcgaacggctgaagatagaggaaaaaacgaaaaagacaaaa
acaggcagttacagtaccagcgaggatgtgctggaaaaactacgatcgaaacatccggtc
gtagacaaactgctcgaataccggggactgaaaaaactgttgagtacctatatcgatgca
ctgcccgaactgatcagtccggtaacaggcaaggtacatacttcctataaccagacggtg
accgccaccggacgcctgagttcgaccaatccgaacctccagaatatccctatccgggat
gaactggggcgcgaaatccgtaaagcgttcattcccgataacgcagattgtaccttcttc
tctgccgactattcgcagatcgaattacgtatcatggctcatctcagcaacgatgagcat
atgattgaagcattccgcagcggagccgatatccatgctgccacagccgcaaaaatatac
ggtattccggtcgaggaagtaagcagcgatatgcggcgtaaggcaaaaacggccaatttc
gggatcatctacggcatttccatattcggccttgccgaacggttgaacattccccgggcg
gaatccaaagaactgatagaaggttatttcaaaagctatccgggtatccgcgattatatg
gatgaaagtatccgtattgccaaagaaaaaggatatgtcgaaacaatcttcaaacgcaaa
cgttacctgccggatatcaattcacataatgccatcgtccgcggttatgccgaacgaaat
gcgatcaacgcccctatccagggaagtgcagccgacattatcaaggtagctatggtacgt
atcttcaaccgtttcgaagcagaagatttgaagagcaaaatgatcctccaggtacacgat
gaattgaacttcaatgtctgcaatgacgaactagaaaaagtaaaacagatcgtcctggaa
gaaatggaaggtgccatcaagctacaggttccgctgatcgccgattgcggcgaaggtgta
aactggctggaagcacattga
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