Pseudomonas synxantha LBUM223: VO64_3426
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Entry
VO64_3426 CDS
T03769
Name
(GenBank) tRNA S(4)U 4-thiouridine synthase (former ThiI)
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb00730
Thiamine metabolism
pfb01100
Metabolic pathways
pfb01240
Biosynthesis of cofactors
pfb04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VO64_3426
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
VO64_3426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfb03016
]
VO64_3426
Enzymes [BR:
pfb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
VO64_3426
Transfer RNA biogenesis [BR:
pfb03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
VO64_3426
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AKA83972
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Position
3843470..3844924
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AA seq
484 aa
AA seq
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MKLIVKVFPEITIKSRPVRTRFIRQLAKNIRAVLRDLDPAVVVNGVWDNLELETRITDAK
ALKDMTERLSCMPGIAHFLQVDEYPLGDFDDITDKCKQHYGSSLEGKVFSVRCKRAGKHP
FSSMDVEKYVGSKLRRECGAAGISLKAPQIEVRMEIRDQRLFVIHSQHDSIGGYPLGALE
QTLVLMSGGFDSTVAAYQIMRRGLMSHFCFFNLGGRAHELGVMEVAHYIWKKYGSSQRVL
FVSVPFEEVLGEILGKVDNSHMGVVLKRMMLRAASRIADQLQIDALVTGEAISQVSSQTL
PNLSIIDCVTEKLVLRPLIASHKQDIIDLAEQIGTADFAKHMPEYCGVISVNPKTHAKRH
RVEHEEKEFDMAILERALENAKLVPIDRVIDELGQDVQIEEVSEALAGQIVIDIRHPDAA
EDEPLEITGIDVQTLPFYALNARFKELDNSRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaatcgttaaagtcttccccgagatcaccatcaagagccgaccggtacggacg
cgtttcatccgtcagttggccaagaacatccgtgccgtgctccgtgacctggacccggct
gtggtggtgaacggcgtgtgggacaatctcgagctggaaacccgtattaccgacgccaaa
gccttgaaggacatgaccgagcgcctgagctgcatgccgggcatcgcgcatttcctgcag
gtggatgagtacccgctgggcgacttcgacgacatcaccgacaagtgcaagcagcactac
ggcagctcgctggaaggcaaggttttttcggtgcgttgcaagcgtgccggcaagcacccg
ttcagctccatggacgtcgagaaatacgtcggcagcaagctgcgtcgcgagtgcggcgca
gctggaatttccctcaaggcgccgcaaattgaagtgcgcatggaaattcgcgaccaacgg
ttgtttgtgattcacagccagcacgacagcatcggcggctacccattgggcgccctggaa
cagaccctggtattgatgtccggcggtttcgattccaccgtggcggcctaccagatcatg
cgccgcggcctgatgagccacttctgcttcttcaacctgggcgggcgtgcacatgaattg
ggcgtgatggaagtcgcgcactacatctggaagaagtacggcagctcccagcgtgtgcta
tttgtgagcgtgccgttcgaggaagtgctgggggaaattctcggcaaagtcgataacagt
catatgggcgtggtattgaagcgtatgatgttgcgcgctgcctcgcgaattgccgatcaa
ctgcagatcgacgcgctggtgaccggcgaagcgatttcccaggtatccagccagacgctg
ccgaacctgtcgatcatcgactgtgttaccgagaagctggtgttgcgcccgctgatcgcc
agccacaagcaggacatcatcgacctggcagaacagatcggcaccgccgattttgccaag
cacatgcctgagtactgcggggtcatctcggtgaaccccaagacccacgccaagcggcat
cgcgtggagcatgaagagaaagaattcgacatggcgattctggagcgtgcgctcgagaac
gccaagctggtcccaatcgatcgcgtcatcgacgagttgggccaggatgtgcaaatcgaa
gaagtcagtgaggccctggccggccagatcgtcatcgacatccgtcacccggacgccgct
gaagacgagccgctggaaattactggcatcgacgtgcaaacgctgccgttctacgcactg
aacgcgcgtttcaaggaactggataacagccgtcagtacctgctgtattgcgacaaaggc
gtgatgagtcgcctgcatgcccaccatttgctcagtgaggggcatgccaatgtgcgcgtt
tatcgaccgagctaa
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