Pseudomonas synxantha LBUM223: VO64_5522
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Entry
VO64_5522 CDS
T03769
Name
(GenBank) iron aquisition yersiniabactin synthesis enzyme (Irp2)
KO
K12240
L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:
6.2.1.69
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb01053
Biosynthesis of siderophore group nonribosomal peptides
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
01053 Biosynthesis of siderophore group nonribosomal peptides
VO64_5522
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
pfb01008
]
VO64_5522
Enzymes [BR:
pfb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.69 L-cysteine---[L-cysteinyl-carrier protein] ligase
VO64_5522
Polyketide biosynthesis proteins [BR:
pfb01008
]
Nonribosomal peptide synthetase (NRPS)
Nonlinear NRPS
Pyochelin synthetase
VO64_5522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Condensation
Thioesterase
Methyltransf_12
TubC_N
Methyltransf_23
Methyltransf_31
Methyltransf_11
Methyltransf_25
PP-binding
AMP-binding_C
DLH
Methyltransf_16
Motif
Other DBs
NCBI-ProteinID:
AKA86068
LinkDB
All DBs
Position
complement(6173015..6178468)
Genome browser
AA seq
1817 aa
AA seq
DB search
MPAAKLLSELKSLGVELWPQDGQLKFRAPQGLLDAERLAQLREHKQQILHLLQTQERPEV
VADPLQRHAPFPLTDVQNAYLLGRQSSFGYGNVACHGYLELSWPSLDPQQVEQAWNRLIA
RHDMLRAVIASEGSQRVLAEVAHYPLAVADLRGATGEQHQHAVQQIRQAMEQKLYPTETW
PLFELRLSRSDSGDTLHFSMDSLIADWASAQLLFNELEQLLHDPQASLPHLDITFRDYLL
AERGLLEGSRHQRDRDYWLARLDELPPAPQLPAPLSGEDTTVPRFQRHSAHLDAQPWAAL
KRAASALGLTPSIVVLSAYAGTLQRWSQQPSFSLNLTLLNRLPLHPQVNQLVGDFTSVSL
LQVNDPQGQDFTAQARQLGNQLFADLEHRLFSGIQVMREIGRRRGREAAAMPVVFTSAIG
LAIEPPAASQRRVGHGITQTPQVTLDCQVMDDANGLHIHWDVRQGAFPDGLVEDMQQAFV
AQLQSLALDPATWEQPMQVPLPAWQQRERLAANATAAPLPTGRLHDGLLAMAWERPQALA
VVDAHGSLTYAALMERALAVAAALGAAGCRAHEPVAILMPKGRDQVVAAYGVLLAGAAYL
PLDSNAPAARRDRVLRSAKVRHVLGHSQAVPDTPLPEGVHWHAVDQLAAATPDLPAQDAN
PDDLAYVIYTSGSTGEPKGVMISHRAALNTVQDINRRFAINAADRVLGLAQLSFDLSVYD
LFGPLAVGGTLVLPDPARGADPSHWAELIQRHQVTLWNSVPAQLHMLAHYLQAEPRPLDS
LRLALLSGDWIPLNLPPQLQTLLPGLALVALGGATEASIWSNLHPIGAIDPAWRSIPYGL
PLANQGFRVLDSQWRDAPTWVPGDLYITGVGLAQGYLGDPALSEARFFAHPLDGQRLYRT
GDRGRYLPGGELEFLGRDDGQVKIRGHRVELGEIDAALLATPGVDSAVSLLSGELLAFVT
AARVEPEPLPGTPLLTAVQRYADSQVGNFDAQQVRDYQADLNAAALSSMLDVMLKAQLFS
GALAEPDAAAILSALQVQPRHHWLVRRWLLALCDAGLLQREQSRYRLLHGAPNPALAWGR
VEQAVACGLCSQALLDYQLNHVAQLPQLLRGDVNPFDLLFPQGQQDLALQLYGGDAVARY
NNHSIAALINRFATHHDGDGPLRILEIGAGTGATSTPVISLLDGLNVDYLFTDITAFFLP
AAKQRFADHAWVRYGVLDIDQDIRPQGLASNSVDIVLCAGMLNSVKDIDNALGQITELLS
PGGWLVFSEPTGEWPPILLTQGFMMTPAGDDHDLGRSGLRAADIWQARVQAFGGECLPAL
PHADHPLAALGMRVFAARFKAGLQRLSVDSLRRALAQRLPDYMLPAHLQVLDRLPLTANG
KVDRKTLANWRPAIDAQAGGNEAVPSDPLTAELCRVWAEALGLAQIGADDNFYEKGADSL
ILARVAGQLREQLPQAHSLSYDTLLRQMLNEPTVSALARLLNHDESTPTAAAPDQSQRAA
HSNALVVPFGGGEVGPVRVMFHAALGTLDYFQHLGRALAAQQAGPVIGFAVADTAQYLAL
EPKRLIESVAQDYADRLIADGHHRFQLIGYCLGGLLATEVARRLLERGMEVVDLSLIDSI
PMFIDTDEELAYEAIFVPNLNLDPVKTVFGAHIEDYDVYRAIDLLMARDNRRVPAGAMAA
LGGDPGLEALALAVRQQSARSQEERLAEYARLASGQAGVPIGPELVPTLFRVCRHSMRAA
RFDPPPFLGNMTYLRCLEQQSFGITGGVGHLAAPFWEDACLGQFNLIDVPGNHFSVIEPP
HVHTVTAHLLEALRKNS
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgccaaactgttaagcgaactcaagtctctgggcgtcgaactctggccccag
gatggccaactcaaattccgtgccccccaaggcctgctggacgccgaacgcctggcgcaa
ttgcgcgagcacaagcagcagatcctgcacctgctgcaaacccaggagcggcccgaggtg
gtggccgaccccttgcaacgtcacgcgcccttcccgctcaccgatgtgcagaatgcctac
ctgctcggccgccagtcatcattcggctacggcaatgtggcgtgccacggttacctcgaa
ctgagctggccgagcctcgacccccagcaggtggaacaggcctggaaccgcctgatcgcc
cgccacgacatgttgcgtgcggtgattgccagcgaaggctcccagcgcgtgctggccgag
gtcgcccattacccactggctgtcgcggacttgcgtggcgccactggcgagcagcaccag
catgccgtacaacagattcgccaggccatggagcagaagctctaccccaccgagacctgg
ccgctgttcgaattgcgcctgagccgcagcgacagcggcgacaccctgcacttttccatg
gactccctgattgccgactgggccagcgcgcaactgctgttcaatgagctggagcagttg
ctgcacgatccccaggccagcttgccgcacctggacatcaccttccgcgactacctgctg
gccgaacgcggcctgctcgaaggcagccgccatcagcgtgaccgtgactactggctggcg
cgtctcgatgaactgcccccggctccgcaactgccggcgcccctgagcggcgaagacacc
acagtgccacgcttccaacgccactcggcgcacctcgatgcgcagccatgggccgccctg
aaaagagccgccagcgccctcggcctcactccctccatcgtggtgctcagcgcctatgcc
ggcaccttgcaacgctggagccagcaaccttccttcagcctcaacctcacgctgctcaac
cgtttaccgctgcacccacaagtcaaccaactggtgggggatttcacctcggtcagcctg
ttgcaggtcaatgatccccagggccaggatttcactgcccaggcacggcaactgggcaac
caattgttcgccgacctggagcaccggctgttttccggcattcaagtgatgcgcgaaatc
ggccgccgtcgcggccgtgaggcagccgccatgccggtggtgttcaccagtgccattggc
ctggcgattgaaccaccggccgccagccagcgccgggtcggccacggcattacccaaacc
ccgcaggtgacccttgactgccaggtgatggacgatgcgaacggcttgcacatccactgg
gacgtgcgccaaggcgcgttccccgacggtttggtcgaggacatgcagcaggcattcgtt
gcccaattgcagtcattggccctcgacccggccacctgggaacaacccatgcaagtgccg
ctaccggcctggcaacagcgtgaacgcctggccgccaacgccaccgccgcgccgctgccc
accgggcgcctgcatgacggcctgttggccatggcctgggaacggccacaggccctggcg
gtggtcgacgcccacggcagcctgacctacgccgccctgatggagcgcgccctggcagtc
gccgcagccctgggcgccgccggttgccgcgcccatgaaccggtggcgatcctgatgccc
aagggccgtgaccaagtggtggcggcctacggcgtgctgctggcgggcgccgcctacctg
ccgctggacagcaacgcccccgccgcccgccgcgaccgcgtactgcgcagtgccaaggtg
cggcatgtgctcggtcactcccaggccgtgccagacacgccattgcccgagggtgtgcac
tggcatgcggtggatcaactggcagccgctacgccggacttgccggcacaggacgccaac
cccgacgacctcgcctatgtgatctacacctccggctccaccggcgagcccaaaggcgtg
atgatcagccaccgcgccgccctcaataccgtgcaggacatcaaccggcgctttgcgatc
aacgccgcggaccgggtgctgggcctggcgcaattgagtttcgacttgtcggtgtatgac
ctgttcggcccgctcgccgtgggcggcaccctggtgctgcccgacccggcacggggcgcc
gacccgtcgcactgggccgagctgatacagcgccatcaggttacgctgtggaactcggtg
ccggcgcagctgcacatgctggcccactacctgcaagccgagccgcgccccctggacagc
ttgcgcctggcgctgttgtcgggtgactggataccgctgaacctgccaccacaactgcaa
acgctgttgccgggcctggccctggtagccctgggaggtgccaccgaagcctcgatctgg
tcgaacctgcaccccatcggcgcgattgacccggcatggcgcagtattccctacggcctg
ccgctggccaaccaggggttccgcgtgctggacagccaatggcgcgatgcgccgacctgg
gtgccgggcgacctgtacatcaccggggtcggcctggcccagggttacctcggcgacccg
gcgttgagtgaagcgcgcttcttcgctcaccccctcgacggccagcgcctgtatcgcacc
ggtgaccgtgggcgctacctgccggggggtgaactggagttcctcggccgtgacgacggc
caggtcaagatccgtggacaccgcgtggagctgggggaaatcgacgccgcactgctcgcc
accccaggcgtggacagcgccgtcagcctgctcagcggcgagctgctggccttcgtcacg
gcggcgcgcgtcgaacccgagccgctgccgggcacaccactgctgacggcagtgcaacgt
tatgccgacagccaggtcggcaactttgacgcgcagcaggtacgcgactatcaggctgac
ctcaacgccgccgccttgagttcgatgctggatgtcatgctcaaggcccagttgttcagc
ggcgcgctggccgagccggatgcagctgccatcctcagtgccttgcaggtgcaaccgcgc
catcactggttggtgcggcgttggttgctggccttgtgtgacgcgggcctgttgcagcgc
gaacaatcccgttatcgcctgctgcacggcgcgccgaacccggcgctggcctggggccgg
gtggaacaggcggtggcgtgcgggctgtgcagccaggcgctgcttgactaccagctcaac
catgtagcgcaactgccgcaactgctgcgcggcgacgtcaacccgttcgatctgttgttc
ccccagggccagcaagacctggcgttgcagctgtatggcggggatgcggtggcccgctac
aacaaccacagcatcgccgcgctgatcaaccggtttgccacccaccatgacggcgatggc
ccgctacgcatccttgaaatcggtgcgggcaccggggccaccagcacgccggtgatcagc
ctgctcgacggcctgaacgtggattacctgttcactgacataaccgcgtttttcctgccg
gcggccaagcagcgctttgccgatcacgcctgggtgcgctatggcgtgctggacattgac
caggatattcgcccccagggcctggccagcaacagcgtggatatcgtgctgtgcgcgggc
atgctcaacagcgtcaaggacatcgacaacgccctcggccagatcaccgaattgctcagc
cccggtggctggctggtgttcagtgaaccgaccggcgaatggccgccgatcctgctgacc
caaggttttatgatgaccccggcgggcgacgaccacgacttgggccgcagcggtttgcgc
gctgccgatatctggcaggcacgggtccaggcattcggcggcgaatgcctgccggcgctg
ccccacgccgaccacccgctggccgccctcggcatgcgggtattcgccgcacgcttcaag
gccgggctgcaacgcttgagcgtcgacagcctgcgccgcgccctggcgcaacgcctgccg
gactacatgctgccggcgcacctgcaagtgctagaccgcctgcccctgaccgccaacggc
aaggtcgaccgcaagacactggccaactggcgccccgccatcgatgcacaggccggcggc
aacgaagcggtgcccagtgacccgctcaccgccgagctgtgcagggtgtgggccgaagcc
ctgggcctggcgcagatcggcgccgacgacaatttctacgagaaaggcgccgattcgctg
atccttgcccgcgttgccggccaactgcgtgaacaactgccccaggcgcacagcctgagc
tacgacaccctgctgcggcagatgctcaacgagccgactgtcagcgccctggcgcgcctg
ctcaaccacgatgaaagcacccccaccgcagcggcgcctgaccagtcgcagcgcgccgcc
cacagcaacgccctggtggtgccgttcggcggtggcgaggtcggcccggtacgggtgatg
ttccatgccgccctgggcaccctggattatttccagcacctgggccgtgcgctcgccgcc
cagcaggcagggccggtgattggctttgcggtggccgacaccgcgcagtacctggctttg
gaacccaagcgcctgatcgaaagcgtggcccaggactacgccgaccgcttgatcgccgac
ggccatcaccgcttccagctgatcggctactgccttggcggcctgctcgccactgaagtc
gcacggcgcctgctggagcgcggcatggaggtggtggacctgagcctgatcgacagcatc
ccgatgtttatcgacaccgacgaagagctggcctatgaggcgatcttcgtgcccaacctc
aacctcgacccagtcaagaccgtgttcggcgcccatatcgaagactacgacgtgtaccgc
gccatcgacctgctgatggcccgcgacaaccggcgcgtgcccgccggggcgatggctgcc
ctgggcggcgacccgggcctggaagcactggcgctggcggtccggcaacaatcggcgcgc
agccaggaagaacgcctggccgagtacgcccgcctggcgtctggtcaggccggggtgccg
atcggccccgagctggtgccgacgctgttccgcgtttgtcgccacagcatgcgggcggcg
cggttcgacccaccaccgttcctcggcaacatgacctacctgcgctgtctggagcagcaa
tcgttcggcattaccggcggtgtcggccacctggcggcgccgttctgggaggacgcctgc
ctgggccagttcaacttgatcgacgtgcccggcaaccacttcagcgtgatcgaaccaccc
cacgtgcacaccgtcaccgcgcacctgcttgaggcccttcggaaaaactcatga
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