KEGG   Pseudomonas fluorescens A506: PflA506_4769
Entry
PflA506_4769      CDS       T02114                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pfc  Pseudomonas fluorescens A506
Pathway
pfc00740  Riboflavin metabolism
pfc01100  Metabolic pathways
pfc01110  Biosynthesis of secondary metabolites
pfc01240  Biosynthesis of cofactors
pfc02024  Quorum sensing
Module
pfc_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pfc00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PflA506_4769 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PflA506_4769 (ribD)
Enzymes [BR:pfc01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PflA506_4769 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PflA506_4769 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AFJ59344
LinkDB
Position
complement(5252309..5253436)
AA seq 375 aa
MTSEQAVLDAHYMARALELARKGLYTTHPNPRVGCVIVRDGQIVGEGWHERTGEPHAEPN
ALRAAGDKARGATVYVTLEPCSHHGRTPPCADALVTAGVARVVAGMQDPNPEVAGRGMQR
LAQAGIEVRSGVLETEARALNPGFLKRMERGLPFVRVKLAMSLDGRTAMASGESQWITGP
AARAAVQRLRAEASVVLTGADTVLGDGARLTVRAAELGLDDATTALAMSRPPLRVLIDGR
LRVPLNAPFFKAGPALVITCVTPENQFPRGPECLVVPGVEGQVDLRSALVALAARGVNDV
LVEAGPSLAGAFAQQGLVDEYVIFIAGKFLGSAARPLLDWPLDKLADAPQLKITEMRAVG
DDWRVTAIPVPAVSV
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgacatctgaacaggctgtgctcgacgcccactacatggcccgtgccctcgaattggcg
cgcaagggcctgtacaccacccaccccaacccgcgggttggctgtgtgatcgtgcgtgac
gggcagattgtcggcgaaggctggcatgagcgcaccggcgagccccatgccgagcccaat
gccctgcgcgccgctggcgacaaggcccgtggcgcgacggtgtacgtgacccttgaaccg
tgcagccatcatggccgtacgccgccctgtgccgatgcgctggtgaccgccggcgtcgcg
cgggtggtggccggcatgcaggacccgaaccccgaagtggctggccgaggcatgcaacgc
ctggcccaggccggtatcgaggttcgtagtggtgtgctggaaaccgaagcgcgggcgctt
aaccccggcttcctcaagcgcatggagcgcggcctgccgtttgtgcgggtcaagctggcg
atgagcctggacggccgcacggcgatggccagcggcgaaagccaatggatcaccggcccc
gccgcccgtgctgcggtgcaacgcttgcgtgccgaggccagtgtggtgttgaccggtgcc
gacacggtactgggcgacggtgcccgcttgaccgtacgcgccgccgaactgggcctggac
gacgcaaccaccgccctggccatgtcgcgcccgccgttgcgcgtgctgatcgatggccgc
ctgcgggtgccgctcaacgcaccgttcttcaaggccggcccggcattggtcatcacctgc
gtgactccggaaaaccagttcccccgcggccctgagtgccttgtggttccaggtgtggag
ggccaggttgacctgcgctcggcattggtcgccctggctgcccgtggcgtcaacgatgtg
ttggtggaagccggcccaagcctggccggcgcgtttgcccaacaaggcctggtggatgaa
tacgtgatattcatcgccggcaagttcctcggctccgctgcccgcccgttgctggactgg
ccgcttgataagttggccgatgctccccaactcaagatcaccgaaatgcgcgctgtgggc
gacgactggcgagtcactgccatccccgtcccagcagtgagcgtataa

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