Pseudomonas ogarae: PSF113_3526
Help
Entry
PSF113_3526 CDS
T01734
Name
(GenBank) Sarcosine oxidase alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
pfe
Pseudomonas ogarae
Pathway
pfe00260
Glycine, serine and threonine metabolism
pfe01100
Metabolic pathways
Module
pfe_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSF113_3526
Enzymes [BR:
pfe01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
PSF113_3526
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
PSF113_3526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
Pyr_redox_3
NAD_binding_8
HI0933_like
DAO
GIDA
Thi4
FAD_binding_3
Lycopene_cycl
Pyr_redox
AlaDh_PNT_C
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AEV63526
LinkDB
All DBs
Position
complement(4142400..4145297)
Genome browser
AA seq
965 aa
AA seq
DB search
MNRLPAPMGLLINRDQPLDFSFDGQHYQGLQGDSIASALLSNGRFLISRSFKYHRPRGPL
TMAGQDANSLVQLPQEPNVLADAYALSAGLQVTAQNVNGSLDNDRDAYLGKFSKFMPVGF
YYRSFYKPKGMWKVWEPIIRKKAGLGVLDLKFQPEYYDKAYLFTDVAVIGAGPAGLHAAL
TAANAGSKVLLIEQQPILGGSLTYARFDIDGNKAENLRRELLAAVEQHANIQILTEATCN
AWFTDNYLPVIQGKRLYKVRARQCLVCSGAFDQPVIFRNNDLPGVMLTSAAQRLMKLYAV
KPGNSAVVLTGNDDGYLAALDLHDQGVDVVAVVDLRQGPSDESLLRALAQRKIYRQGNST
VYEALHEKGMRHINGVDVRQITAQGQVAESGQYLACDLLCMSAGYMPVYQLLCQAGGKLA
YDDQRAEFTLSGLPRNLNIAGSVNGRHQLDNVIADGVNAGAEAALALGLTVGTQRASFSG
EARVNFNWPIFPHPKGKDFVDFDEDLQVADIINATKIGYRDVQLVKRYSTVGMGPSQGRH
SALPTARLVAWATQRNISETGVTTARPPFVAEKLAHVAGRAFDPYRQTPMHARHLQAGAK
MMPAGIWQRPAYYGNAKDREACMQAEALHVRNKVGIIDVSTLGGLDVRGPDAAELLNRMY
TFAFLKQPVGRSRYALMTNEHGVVIDDGVCARLAEHHFYVTATTSGVDRIYQQMLKWNAQ
WRLDVDVANVTAAICAVNVAGPDSRKVLEQVCTDLDLSAEAFPYLGVRQGTVAGIKARLL
RVGFVGELGYEIHVPARHGLMLWDALMEAGKAHDIRPFGVETQRLLRLEKGHVIISQDTD
GMTHPAEIDMGWAVSRNKPFFVGRRSVDILEAQPLKRKLVGFSLPKGSAQPLEGHLVLNG
PDISGNVTSCEYSATLGRIIGLAYAGIEQSAPGQHIPIRVEGGIIVQAEVVQLPFFDPTN
QRQEG
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcctacccgcccccatgggcctgctgatcaaccgcgatcagccgctggatttc
agtttcgacgggcagcactaccaaggcttgcaaggcgacagcatcgccagcgccctgttg
tccaacgggcgtttcctgatctcccgctcgttcaaataccaccgcccgcgcggcccgttg
accatggccggccaggatgccaacagcctggtgcaactgccccaggaacccaatgtgctg
gccgatgcctatgcactgtccgcggggttgcaggtgacggcgcagaacgtcaacggctcg
ctggataacgaccgcgacgcctacctgggcaagttctccaaattcatgccagtgggcttc
tactaccgctccttctacaagcccaaaggcatgtggaaggtctgggagccaatcattcgc
aagaaggccggcctcggtgtgctcgacctgaagttccagcctgagtattacgacaaggcc
tacctgtttaccgacgtcgccgtcatcggtgcaggtcccgccgggctgcacgctgccctg
accgccgccaacgccggatccaaggtgttgctcatcgagcaacagccgattctcggcggg
tcgctcacctatgcccgcttcgatatcgacggcaacaaggctgaaaacctgcgccgcgaa
ctgctcgcggcggtcgagcaacacgccaatatccagatcctgaccgaagccacgtgcaac
gcctggttcaccgataactacctgccggtgatccagggcaaacgcctgtacaaagtgcgc
gctcgccaatgcctggtgtgcagcggcgcgttcgatcagccggtgatcttccgcaacaac
gacctgccgggcgtgatgctgaccagcgccgcgcaacggctgatgaagctgtatgcggtc
aaaccgggtaacagcgccgtggtgctgacaggcaacgatgacggctacctcgccgcgctg
gatctgcatgaccagggcgtagatgtcgtcgcggtggtggacctgcgccaagggccttcg
gacgaatccctgctgcgcgcgctggcgcaacgcaagatctatcgtcagggcaacagcacc
gtctatgaggccctgcacgagaaaggcatgcgccatatcaacggcgtcgacgtgcgccag
atcaccgcacaaggccaggtcgccgagagcggacaatatctggcgtgcgacttactgtgc
atgtccgccggttacatgccggtctatcaactgctgtgccaggccggcggcaaactggcc
tacgacgatcaacgtgccgagttcacgctcagcggcctgccacggaatctgaatatcgcc
ggttcggtcaacggtcgtcatcagctggataacgtgattgccgatggcgtgaatgccggt
gccgaagccgccctcgcgctgggcctgacagtcggcacgcaacgcgcatcgttcagcggt
gaagcccgggtcaacttcaattggccgatcttcccgcatcccaaaggcaaggacttcgtc
gacttcgacgaggatctacaagtggccgacatcatcaacgcgaccaagatcggctatcgc
gacgtgcaactggtcaagcgctactccaccgtcggcatgggcccgtctcagggtcgtcac
tcggcgctgccgaccgcgcggttggtggcgtgggccacccaacgcaacatcagcgaaacc
ggtgtgaccacggcacggccgccgtttgtggccgagaagctggcgcatgtcgccgggcgc
gcgttcgatccgtaccggcaaacgccgatgcatgcccgacacctgcaagctggcgcgaag
atgatgcctgcgggcatctggcaacgcccggcctactatggcaacgctaaggatcgcgaa
gcctgcatgcaggccgaagccctgcacgtgcgcaacaaggtcggcatcatcgatgtctcg
accctcggtggcctggatgtgcgcggcccggacgccgccgagctgctcaaccgcatgtac
acttttgccttcctcaagcaaccggtcggccgctcccgctatgcgctgatgaccaacgag
cacggggtggtgatcgatgacggtgtctgcgcacggttggccgagcatcacttctacgtc
accgccaccaccagtggtgtcgaccggatctatcagcaaatgctcaagtggaacgcgcaa
tggcgcctcgacgtggacgtcgccaacgtcaccgcggccatttgcgcggtcaacgtcgcc
gggcccgattcgcgcaaagtgctggagcaggtctgcaccgacctggatctgagcgccgaa
gcgtttccttatctcggtgtgcgccagggcaccgtggccggcatcaaggcccgtttgctg
cgcgtgggttttgtcggcgaactgggctatgaaatccacgtgccggcgcgtcacgggctc
atgctctgggacgcgctgatggaggccggcaaggcccatgacatccgcccgttcggcgtc
gaaacccaacgtttgctgcgcctggaaaaaggccacgtgatcatcagtcaggacaccgac
ggcatgacccatccggcagaaatcgacatgggctgggcggtcagtcgcaacaaaccgttc
ttcgtcggccggcgctcggtggacatcctcgaagcccagccgctgaaacgcaaactggtg
ggtttctccttgcccaagggcagcgcacaaccgctggaaggccacctggtactcaacggc
ccggacatcagcggcaacgtcacctcctgcgaatactccgccacgctgggccgaatcatc
ggcctggcctacgccggtatcgagcagagtgccccgggacagcacattccgattcgcgtc
gaaggcggcatcatcgtccaggccgaagtggtgcaactgcccttcttcgaccccaccaac
caacgccaggagggttaa
DBGET
integrated database retrieval system