Pseudomonas ogarae: PSF113_3750
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Entry
PSF113_3750 CDS
T01734
Symbol
nirD
Name
(GenBank) NirD
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
pfe
Pseudomonas ogarae
Pathway
pfe00860
Porphyrin metabolism
pfe01100
Metabolic pathways
pfe01110
Biosynthesis of secondary metabolites
pfe01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PSF113_3750 (nirD)
Enzymes [BR:
pfe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
PSF113_3750 (nirD)
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GFIT
Motif
Pfam:
AsnC_trans_reg2
HTH_AsnC-type
AsnC_trans_reg
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AEV63751
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All DBs
Position
complement(4437237..4437695)
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AA seq
152 aa
AA seq
DB search
MTSSSLARRLIDQFQHGLPLCTEPYRAMAETLGCSEAQVIDCLQHLQVAGTLSRVGPVFE
HTRAGASTLAALAVPEERLHQVAARISQYPEVNHNYAREHRYNLWFVLTGPNRAHLENIL
QELENDTGLTPLDLPMLTAYRIDLGFALEATP
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgacttccagctcactggcccggcgcctgatcgatcaattccagcatggcctgccgttg
tgcaccgagccctaccgggccatggccgagaccttgggctgcagcgaagcccaggtcatc
gactgcctgcaacacctgcaagtggccgggaccttgtcgcgggtcggcccggtgttcgaa
cacacccgagccggggccagcaccctggccgccctggccgtgcccgaagagcgcttgcac
caagtggccgcacgcatcagccaatacccggaagtcaatcacaactatgcccgcgaacat
cgctacaacctctggttcgtgctgaccggccccaaccgcgcccacctggaaaacatcctc
caggaactggagaacgacaccggtctcacgccactggacctgcccatgctgaccgcctac
cgcatcgacctgggctttgccctggaggccaccccatga
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