KEGG   Pseudomonas ogarae: PSF113_5240
Entry
PSF113_5240       CDS       T01734                                 
Symbol
ribD
Name
(GenBank) RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pfe  Pseudomonas ogarae
Pathway
pfe00740  Riboflavin metabolism
pfe01100  Metabolic pathways
pfe01110  Biosynthesis of secondary metabolites
pfe01240  Biosynthesis of cofactors
pfe02024  Quorum sensing
Module
pfe_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pfe00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PSF113_5240 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PSF113_5240 (ribD)
Enzymes [BR:pfe01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PSF113_5240 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PSF113_5240 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AEV65220
LinkDB
Position
complement(6078034..6079167)
AA seq 377 aa
MTASAQQAILDAHYMARALELARRGHYTTHPNPRVGCVIVREGQIVGEGWHIRAGEPHAE
VHALRAAGEQARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGL
QRLAQAGIATESGVLEGEARKLNEGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWIT
GAAARSAVQRLRAQASVVLTGADTVLADNARLTVRADELGLDAEQTALVMSRPPLRVLVD
GRLRVPLDAAFFKAGPALVATCMAVEEQYANGPECMIVAGDDGQVDLHRLLVELAGRGVN
EVLVEAGPRLAGAFAQQGLVDEFQIFIAGKFLGSSARPLLDWPLAQMKDAPQLKITEIRA
VGDDWRVIAVPVAQASV
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgaccgcctcggcgcagcaagccatcctcgacgcccactacatggcccgtgccctggag
ttggcgcggcgcggtcactacaccacccaccccaatccccgggtcggttgcgtgatcgtg
cgtgaggggcagatagtcggcgaaggctggcacatccgcgctggcgagccccatgccgaa
gtccatgccctgcgcgccgctggcgaacaggcccgcggtgccacggcctacgtgaccctc
gaaccgtgcagccatcacgggcgtacgccgccgtgtgccgatgcgctggtcaatgccggc
gtggcgcgggtggtggcggcgatgcaggaccccaacccggaagtcgccgggcgtggcctg
caacggctggcccaggccggcatcgccaccgaaagcggcgtgctggaaggcgaagcgcgc
aagctcaatgaagggttcctcaaacgcatggagcacggcctgccgttcgtgcgggtcaag
ctcgccatgagcctcgatggccgcaccgccatggaaagcggcgaaagccagtggatcacc
ggcgccgccgcacgctcggcggtccaacgcctgcgcgcccaggccagcgtggtattgact
ggtgccgacacggtgctggcggacaacgcccggttgaccgtgcgcgccgatgaactgggg
ctcgatgccgagcagacggcgttggtcatgagccgtccgccgctgcgggtactggtggac
gggcgcctgcgggtgccgctggatgccgcgtttttcaaggctggcccggcgttggttgcg
acctgcatggcggtggaagaacaatacgccaacggtcccgaatgcatgatcgtggcgggc
gatgacggccaggtcgatctgcatcgcctgctggtcgaactggcgggccgtggcgtcaac
gaggtgctggtggaagccggtccgcgcctggcgggggctttcgcccagcaagggttggtc
gatgagttccagattttcatcgccggcaagttcctcggttcttcggcgcgaccgctgttg
gactggccgctggcgcagatgaaggacgccccgcagctgaaaatcaccgaaatccgcgcc
gtgggcgatgactggcgagtcatcgccgttcccgttgcgcaggcgagcgtataa

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