Pseudomonas ogarae: PSF113_5432
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Entry
PSF113_5432 CDS
T01734
Symbol
soxA
Name
(GenBank) SoxA
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
pfe
Pseudomonas ogarae
Pathway
pfe00260
Glycine, serine and threonine metabolism
pfe01100
Metabolic pathways
Module
pfe_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSF113_5432 (soxA)
Enzymes [BR:
pfe01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
PSF113_5432 (soxA)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
PSF113_5432 (soxA)
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
NAD_binding_8
DAO
HI0933_like
GIDA
Pyr_redox_3
FAD_binding_3
Pyr_redox
Thi4
AlaDh_PNT_C
Lycopene_cycl
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
AEV65404
LinkDB
All DBs
Position
complement(6281921..6284938)
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AA seq
1005 aa
AA seq
DB search
MSQINRLSNGGRIDRNKALSFTFNGQTYKGFEGDSLAAALLANGVDIIGRSFKYSRPRGI
YAAGAEEPNAVLQIGATEATQIPNVRATQQALYQGLVATSTNGWPNVNNDMMGILGKVGG
KLMPPGFYYKTFMYPQSFWMTYEKYIRKAAGLGRSPTENDPDTYDYMNRHCDVLIVGAGP
AGLAAALAAARSGARVILADEQEEFGGSLLDSRESLDGKPAIEWVAAAVAELRSMPEVVL
LPRATVNGYHDHNFLTIHERLTDHLGDRAPIGQVRQRINRVRAKRVVLATGACERPLVYG
NNDVPGNMLAGAVSTYVRRYGVAPGKKLVLSTNNDHAYRVALDWFDAGLQVVAVADARSN
PRGALVEEARAKGIRILTGSAVIEARGSKRVTGARVAAIDVRAHKVTSPGEWLDCDLVAS
SGGYSPVVHLASHLGGKPIWREDILGFVPGEAPQKRVCVGGVNGVYSLGDTLADGFEGGV
RAANEAGFKAVEGVLPKALSRHEEPTLALFQVPHEKSTARAPKQFVDLQNDVTAAAIELA
TREGFESVEHVKRYTALGFGTDQGKLGNVNGLAIAARSLNVSIPQMGTTMFRPNYTPVTF
GAVAGRHCGHIFEPVRYTALHAWHVKSGAEFEDVGQWKRPWYFPKNGEDLHAAVKRECKA
VRDSVGLLDASTLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGV
TACLADNHFLMTTTTGGAARVLQWLEIYHQTEWPDLKVYFTSVTDHWATMTLSGPNSRKL
LSDVTDIDLDKDAFPFMTWKEGLVGGVPARVFRISFTGELSYEINVQADYAMGVLEQIVE
AGKKYNLTPYGTETMHVLRAEKGFIIVGQDTDSSMTPDDLNMGWCVGRTKPFSWIGWRGM
NREDCVREDRKQLVGLKPIDPNVWLPEGAQLVFNTKQAIPMTMVGHVTSSYAHNSLGYSF
AMGVVKGGLKRMGERVFAPLADGSVIEAEIVSSVFFDPKGDRQNI
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgagccagatcaatcgcctgtccaacggtggacggatcgaccgcaacaaagcgctgagc
ttcaccttcaacggccagacctacaaaggcttcgagggcgattccctggccgctgcgctg
ctggccaacggtgtcgacatcatcggccgcagtttcaaatattcgcgtccgcgcggtatt
tacgccgccggtgccgaagaaccgaacgcagtgctgcagatcggcgccaccgaagccacg
caaatccctaacgtgcgcgccacgcaacaggcgctgtaccagggtttggtcgccaccagc
accaacggctggccgaacgtgaacaacgacatgatggggattctcggcaaggtcggcggc
aagctgatgccgccgggcttctactacaaaaccttcatgtacccgcaatcgttctggatg
acctacgagaagtacatccgcaaggctgccggcctgggtcgctcgccgaccgagaacgat
ccggacacctacgactacatgaaccgtcactgcgacgtgctgatcgtcggcgcaggcccc
gcgggcctggccgccgcactggccgcggcccgcagcggtgcgcgtgtcatcctggccgat
gagcaggaagagttcggcggcagcctgctcgactcccgcgagagcctggacggcaagccc
gcgatcgaatgggtcgctgcggcggtggctgaactgcgctcgatgccagaagtggtgttg
ctgcctcgcgccacggtgaacggttaccacgaccataacttcctgaccatccacgagcgc
ctcaccgaccacctcggcgatcgcgcaccgatcggccaggtccgccaacgcatcaaccgc
gtccgcgccaagcgcgtggtcctggcgaccggtgcctgcgagcgcccgctggtctatggc
aacaacgacgtgccgggcaacatgctggcgggtgcggtgtccacctacgtgcgtcgctac
ggcgtggcaccgggcaagaaactggtgctgagcaccaacaacgaccacgcctatcgcgtg
gccctggactggttcgacgccggcctgcaagtggtggctgttgccgatgcgcgcagcaac
ccgcgtggtgcgctggtggaagaagcccgcgccaagggcattcgcatcctcaccggcagc
gccgtgatcgaggcccgtggcagcaagcgcgtcaccggggcacgtgttgccgcgatcgac
gtgcgagctcacaaagtcaccagccccggcgaatggctggactgcgacctggtggccagc
tccggcggctacagcccggtggttcacctggcttcgcacctgggtggcaagccgatctgg
cgtgaagacatcctcggtttcgtaccgggcgaagcaccgcaaaagcgtgtctgcgtcggt
ggtgtgaacggtgtctacagtcttggtgataccttggctgacggttttgaaggcggcgtg
cgcgcggccaacgaagccggcttcaaggccgtggagggcgtgttgcccaaagccctgagc
cgccatgaagagccaaccctggcgctgttccaggtgccccacgaaaaatccactgcacgg
gcgccgaagcaattcgtcgacctgcagaacgacgtcaccgccgccgccatcgagctcgcc
acccgcgaaggcttcgagtcggtggaacacgtcaagcgctacaccgcactgggcttcggt
accgaccagggcaagctgggcaatgtcaacggcctggccatcgcggcccgctcgctgaac
gtgagtatcccgcagatgggcaccaccatgttccgtccgaactacacgccggtgaccttc
ggcgcggtggcgggccggcactgtgggcacatcttcgagccggtgcgttacaccgcactg
catgcctggcatgtgaaaagcggcgccgagttcgaagacgtcggccagtggaaacgccct
tggtacttcccgaagaacggtgaagacctgcatgccgcggtcaagcgcgaatgcaaggcc
gtgcgcgacagcgttggcctgctggacgcctcgaccctgggcaagatcgacatccagggc
ccggacgcccgtgagttcctcaaccgcgtctacaccaacgcctggaccaagctcgacgtg
ggcaaggcccgctacggcctgatgtgcaaggaagacggcatggtcttcgacgacggcgta
acggcctgtctggcggacaaccacttcctgatgaccaccaccacgggcggcgcggcgcgc
gtgctgcaatggctggagatctatcaccagactgaatggccggacctgaaggtgtacttc
acctcggtcactgaccactgggcgaccatgaccctgtcgggccccaacagccgcaagctg
ctgagcgacgtcactgacatcgacctggacaaggacgctttcccgttcatgacctggaag
gagggcctggtgggcggtgtaccggcgcgggtgttccgcatctcgttcaccggtgagctg
tcgtacgaaatcaacgtccaggccgactacgccatgggcgtgctcgagcagatcgtcgag
gccggcaagaagtacaacctgaccccgtatggcaccgagaccatgcacgtattgcgggcc
gagaagggcttcatcatcgtcggtcaggacactgacagctcgatgaccccggacgacctg
aacatgggctggtgcgtaggacgtaccaaaccgttttcgtggatcggctggcgcggcatg
aatcgcgaagattgcgtgcgtgaagaccgcaagcaactggtgggcctcaagccgatcgac
ccgaatgtctggctgccggagggcgcgcaactggtgttcaacaccaagcaggcgatcccg
atgaccatggttggtcacgtgacctccagctatgcccacaactccctgggttattcattt
gccatgggcgtggtcaagggcgggctcaagcggatgggcgagcgagtgttcgcgccactg
gccgacggcagcgtgatcgaggcagagattgtttcttcggtgttcttcgatccgaagggg
gatcggcagaatatctaa
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