Pseudomonas ogarae: PSF113_5446
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Entry
PSF113_5446 CDS
T01734
Symbol
dgcB
Name
(GenBank) DgcB
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
pfe
Pseudomonas ogarae
Pathway
pfe00260
Glycine, serine and threonine metabolism
pfe01100
Metabolic pathways
Module
pfe_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSF113_5446 (dgcB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_10
Fer4_8
Fer4_17
Fer4_9
Fer4_2
Fer4_6
Fer4_16
Fer4
Fer4_4
Fer4_7
Fer4_21
Fer4_22
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
AEV65418
LinkDB
All DBs
Position
complement(6302984..6304936)
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AA seq
650 aa
AA seq
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MLNTLLPILLFAALGLAVLGALRRVNMWRRGRPAKVDLIGGLFAMPKRYMVDLHHVVARD
KYIANTHVATAGGAVASVVLAILVHGVGLHNRLLGYALLLMSAVMFVGAIFVYLRRRNPP
ARLSKGPWMRLPKSLLAFSASFFLVTLPVAGILPENFGGWLVAAILGVGVLWGVSELFFG
MTWGGPMKHAFAGALHLAWHRRAERFGGGRSTGLKPLDLNDPSAPLGVEKPKDFTWNQLL
GFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPGKPVGEHAG
NPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPNKGAEV
LENLIATDNPGGFAPGGRMNWAADLNLNLLSEKKSTDVLFWVGDGAFDMRNQRTLRAFVK
VLKAAKIDFAVLGLEERDSGDVARRLGDEATFQLLAKRNIQTLAKYSFNRIVTCDPHSFH
VLKNEYGAFDGNYLVQHHSTYMAEIIDAGALNLGQHKGDSVTYHDPCYLGRYNGEYEAPR
QVLRALGIQVKEMQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMEDIRETGAELVAVGC
PQCTAMLEGVVEPRPMIKDIAELVADALLEDAAPSKPVTPVKRELAQVHS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacacccttcttcccatcctgctgtttgctgccctgggcctcgcggtccttggc
gccttgcggcgggtgaacatgtggcgccgcggacgaccggccaaggtcgacctgatcggc
ggtctcttcgccatgcccaagcgctacatggtggatttgcaccatgtggtggcgcgggac
aaatacattgccaatacccacgtcgccacggccggtggtgcggtggcgtcggtggtgctg
gcgatcctggtccacggggttggcctgcataatcgcttgctcggctatgcgttgctgttg
atgtcggccgtgatgttcgtcggtgcgatcttcgtctacctgcgtcggcgcaatccaccg
gcccgtttgtccaagggtccctggatgcgcctgccgaaaagcctgctggccttctcggcg
tcgttcttcctggtgaccctgccggtggcgggcatcctcccggaaaacttcggcggttgg
ctggtggcggcgatcctgggtgtcggcgtgctgtggggtgtgtcggaattgtttttcggc
atgacctggggcgggccgatgaaacatgccttcgccggtgccctgcacctggcctggcac
cgccgagcggagcgctttggtggcggtcgttccaccggtctgaagccgttggacttgaac
gaccctagcgcaccgctgggtgtggaaaaacccaaggatttcacctggaaccaactgctg
ggcttcgatgcctgcgtgcagtgcggcaagtgtgaggctgcttgcccggcgttcgctgcc
ggccagccgctgaacccgaaaaaactcatccaggacatggtcgtcggcctggccggcggc
accgatgcgaaattcgccggcagcccgtatccgggtaaaccggtgggcgaacatgctggt
aatccccatcagccaatcgtcaacggcctggtggacgccgagaccctgtggtcttgcacc
acctgccgggcgtgcgtcgaggagtgcccgatgatgatcgagcacgtcgacgccatcgtc
gacatgcgccgccacctgaccttggaaaaaggcgccacgccgaacaagggcgccgaagtg
ctggaaaacctcatcgccaccgacaaccctggcggcttcgccccgggcgggcggatgaac
tgggcggcggacttgaacctgaacctgctcagcgagaagaaatccaccgacgtgctgttc
tgggtcggcgacggtgctttcgacatgcgcaaccagcgcaccttgcgcgccttcgtcaaa
gtactcaaggcggcgaaaatcgacttcgccgtgctcggcctcgaagaacgcgacagcggc
gacgtggcccggcgcctgggcgatgaggcgacgttccagctgttggccaagcgcaacatc
cagaccctggccaaatacagcttcaaccgcatcgtcacctgcgacccccacagtttccat
gtgctgaaaaacgaatacggtgccttcgatggcaactacctggtgcagcaccacagcacc
tatatggcggaaatcatcgacgccggtgcgctgaacctcggccagcacaagggcgacagc
gtgacctatcacgacccgtgctacctgggccgctacaacggcgaatacgaggcgccgcgc
caggtgctgcgtgcgctgggtatccaggtcaaggagatgcagcgttccggtttccgttcg
cgttgctgcggcggtggtggcggtgcgccgatcaccgacatcccgggcaagcagcggatt
cctgacatgcgcatggaagacatccgcgaaaccggcgctgaactggtggccgtgggttgt
ccacagtgcaccgcgatgctggaaggcgtggtcgagccgcggccgatgatcaaggacatc
gccgaactggtggccgacgcgctgctggaagacgcggccccgagcaaaccggtgaccccg
gtcaaacgtgaactcgcgcaggtgcattcatga
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