Paludibaculum fermentans: IRI77_27055
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Entry
IRI77_27055 CDS
T06895
Name
(GenBank) response regulator
KO
K13924
two-component system, chemotaxis family, CheB/CheR fusion protein [EC:
2.1.1.80
3.1.1.61
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer02020
Two-component system
pfer02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IRI77_27055
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
IRI77_27055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pfer02022
]
IRI77_27055
02035 Bacterial motility proteins [BR:
pfer02035
]
IRI77_27055
Enzymes [BR:
pfer01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.80 protein-glutamate O-methyltransferase
IRI77_27055
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.61 protein-glutamate methylesterase
IRI77_27055
Two-component system [BR:
pfer02022
]
CheA family
CheA-CheYBV (chemotaxis)
IRI77_27055
Bacterial motility proteins [BR:
pfer02035
]
Flagellar system
Chemotaxis proteins
Two component system proteins
IRI77_27055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CheB_methylest
CheR
HATPase_c
Response_reg
CheR_N
HisKA
PAS_4
PAS_8
PAS
HPTransfase
DUF745
PAS_9
EXOC6_Sec15_N
TPR_MLP1_2
HMMR_N
Methyltransf_12
WEMBL
Sec8_N
DUF3584
Motif
Other DBs
NCBI-ProteinID:
QOY86435
UniProt:
A0A7S7NMQ1
LinkDB
All DBs
Position
complement(6864668..6868462)
Genome browser
AA seq
1264 aa
AA seq
DB search
MDNMETPKGAPQSPAEETGRPAANDTRDAQLSAIPVAGIGASAGGLEVFKRLLAELPVDT
GMAVVFVQHLEPSHQSMLAQILSRATSMPVNEAADGMRVEANQVYVIPANVDLTIVGGTL
RLAARTQTPGLHMPIDGFLRSLALDCGNRAIAVILSGAGSDGSTGVQAVKAAGGLTFAQD
EASAKFPMMPQAAVATGCVDFVLPPDRIAAELARISRHPYIAQNPPTPIESKPGGDDAQF
TKILSILREASGIDFSLYREKMVRRRILRRLALRSISDLAEYGVRLAQDPAELIALQKDL
LISVTSFFRDPDSLEALKTAVFPQLLADRRPDDTVRVWVAGCASGEEAYTIAILLREYFH
ETGVAFPVQIFASDINTDAIGKARAGKYPANIASDLTQTRLDTWFTKAESGYRINKDLRE
MCVFTRHNLLDDPPFSKLDLISCRNVLIYLGGVQKDVLPLFHYALKPSGFLLLGASEAAA
SGDLFTVADSEHRIFVKHDKTLKTHIFPGGIRGLRRATSRGNQPAVSAADTWKGTDLRKE
VDRILLSKYSPAGVVVDQDLEVLEIRGQANPYLSLPAGKVSFNLIKLIRDTGLFLEIEKL
IQEAQATGEPVRRQHLLFEQQGTAGELTVEAVPLESEHKRSTLLLFEPLAEPALQADRPA
GEDSGSQSRDVQITRLKQQLAEAKERFLSALEAHQSTREEIQSTTEEALSANEELQSLNE
EMETAKEELQSTNEELITVNDELQAKNAALAQARDFAVSIVETVRQPLLVLDTEFRIRMA
NQAFYRTFHLSPLEAEGRPLYLLSGGSWDLPVIRQSLDSLLRSGRPFTDLEVEQEFPRAG
RRSLVVGGCCIKHLQMLLLAMDDVTERKLVQLALHNSEEHLRQSQKMEAVGRLAGGIAHD
FNNLLTTIIGYSDLLEGALQGQATLVQQVGEIKAAGQRAASLTQQLLSFSRRQVLQPKVL
DLNLIVKDFDRMLRRLVGEQIQVQIRCEPSLWHVRVDSGEIGRAVMNLTLNARDAMPDGG
TLTLETANVTLTEAEAGKAFLKAGRYVTLAVRDTGIGFDSDVRAHIFEPFFTTKATGKGT
GLGLATVLGIVEQSGGVIDCESEPGVRTSFTIYLPAVDMAASSGSVLVQSLNSAPRGTET
VLLAEDEDMLRVLARRILESVGYVVFEASNGREGLEFCRNHEGQIDLLVTDVVMPELGGR
ELAEGALILRPNLKVLFISGHTQDVVLKAGVQKGAAFLQKPFTPAVLAQKVRETLDSTAN
TSGE
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggacaacatggaaacacccaagggtgccccacagagcccggcggaggaaaccggacgc
cccgcagcgaacgacacccgggacgctcaactgagcgcaattcccgtggctgggattgga
gcctccgcgggtggtcttgaggtgttcaagcgcctgctcgccgaactgcctgtcgacacc
ggcatggccgttgtattcgtccagcacctcgagccaagccatcagagcatgctggcgcag
attctgtcgcgcgccacctccatgccggtgaacgaggcagccgacgggatgcgggtcgaa
gcgaaccaagtttacgtaattccagcgaacgtcgacctgacaatcgtgggcggaacgctc
aggctggcggcccgcacccagacgcccgggctgcacatgcccatcgatggctttctgcgc
tccctggcgctggattgcggcaacagggccatcgcggtcatcctgtccggtgcgggttcc
gacggttcgaccggtgtgcaagccgtaaaagccgccggcggcctgaccttcgcccaggat
gaagccagcgccaagtttcccatgatgccgcaagccgcggtggccaccggttgcgtggat
tttgtgctcccccctgaccgcattgcggctgaactcgcccggatcagccggcacccctac
atcgcccagaatccgcctacgccaatcgaatccaagcctggcggcgatgacgctcaattc
acaaagattctctccatcctgcgggaggcctcgggcatcgatttctcgctgtaccgggaa
aagatggtgcggcggcggatcctgcgccggctcgcgcttcgcagcatcagcgacctcgca
gagtacggagtgcgtctggcccaggatcccgccgagctgatcgcgctgcagaaggatttg
ctcattagcgtgacttccttcttccgcgatccggactcgttggaggccctgaaaacggcg
gtctttccccagttgctcgcggatcgcaggccggacgacacagtccgcgtctgggtggcg
ggctgcgcttccggggaggaagcttacaccattgcgatcctgctgcgcgagtattttcac
gaaaccggcgtcgcatttccggtccagatctttgcctccgacatcaataccgacgcaatc
ggcaaagcccgagccggtaagtaccctgccaacatcgcatccgatctgactcagacgcgg
ctggacacctggttcacgaaagccgaatcaggctaccggatcaataaggatctccgcgag
atgtgtgtcttcacccggcacaatcttctggacgatcctcccttctccaagctcgacctg
atcagttgccggaacgttctcatctatctcggcggagtgcagaaggacgttctgccgctc
ttccactatgcgttgaaaccctccggatttctgctgttgggcgcgtccgaagcggccgct
tccggtgacctcttcacggtggcggacagcgagcaccggatctttgttaagcacgacaag
accctgaagacgcacatcttccccggggggatccgaggattgcgcagggcgacctcacgc
ggcaaccagccggccgtgagtgcggcggacacctggaagggcacggatctgcgtaaggaa
gtcgaccggatcctgttgtcgaaatacagccccgccggcgtagtggtggaccaggacctg
gaggttctcgagatccggggccaagccaatccttacctgtccctgccggcaggcaaggtg
agtttcaacctgatcaagctgattcgcgacaccggcctgttcctcgaaatcgagaaattg
atccaggaggcccaggcgaccggagaacctgtgcgcaggcagcatttgctctttgagcag
cagggaaccgccggcgaactgacagtcgaggcggtaccgctggagtcggagcataaacgg
tcgacgctgctcctgttcgagcccctggcggaacctgcgctgcaggctgaccggccggcg
ggagaagacagcggcagccagagccgcgatgttcagatcacgaggttgaagcagcaactg
gcagaggccaaggagcgctttctctccgccctcgaggcacaccaatcgaccagggaagag
attcagagcaccaccgaagaggcgctgtccgccaatgaggaactgcagagcctgaacgag
gagatggagacggcaaaggaggaactgcagtccaccaatgaagagctcatcacggtcaac
gacgaattacaggccaagaacgcggcgctcgcgcaggctcgcgatttcgccgtctcgatc
gtcgaaaccgtcaggcagcccctgcttgtactggatacggagttccgtatcagaatggca
aaccaggccttctatcgaacattccacctatcccctctcgaagcggaaggacgcccgctc
tatttgctctccggcggcagttgggacctgccggtgatccggcagtcactcgactctttg
ctccgtagcggccgcccgttcactgatcttgaagtcgagcaggagttccccagggcggga
cgtagaagtctcgtcgttggcggctgctgtatcaaacacttgcagatgctgctgctggcg
atggacgacgtcaccgaacggaagctggtccaattggccctgcacaattccgaagagcat
ctgcgccagtcccagaagatggaggcggtcggccgcctggccggcggcatcgcccacgat
ttcaacaacctgctcacgaccatcatcggctacagcgatcttctggaaggcgcgctgcag
ggccaggcgacactggtccagcaggtgggtgagatcaaggcggctggacaacgggccgcc
tccctgacgcaacaattgctgtcctttagccggcgccaggtgctgcagcccaaggtgctg
gacctgaatctcatcgtgaaggattttgacagaatgctgcgccgccttgtgggcgagcag
atacaggtacagatccgctgcgaacccagtctctggcacgtccgcgtcgactcgggtgag
atcggccgcgccgtaatgaatctcaccttgaatgcacgagacgcgatgccggacggcgga
acgctcaccctcgaaacagcgaatgtaaccctcacggaagctgaagcaggcaaggcgttt
ctaaaagccgggcgctatgtgacgttggcggtccgcgacacgggcatcgggtttgattca
gacgtgcgggcccacatcttcgagccgttcttcacgacgaaggccaccggcaagggaacg
ggcctgggcttggcgaccgtcctgggcatcgtggagcagagcggcggcgtaatcgactgc
gaatcggagccaggagtgagaacctcattcacgatctatctgccggccgtcgacatggcg
gcatcctcgggctcagtcctggtccaaagcctcaacagtgcacctagaggtactgagaca
gtcctgctggcggaagacgaggacatgttgcgcgtcctcgcccggaggatcctggaatcg
gttggctacgtcgtcttcgaggccagcaacggccgcgagggactcgagttctgcaggaac
cacgagggccagatcgacctgctggtaaccgatgtcgtcatgccggaactgggcggcagg
gaactcgctgagggcgcgctcatcctgcgcccgaacctcaaggtcctctttatctcaggc
cacacgcaggacgtcgtactgaaggccggagtacagaagggcgcagccttcctacagaag
cccttcactccggcggtgctggcgcagaaggtacgcgagacactcgactccaccgcaaat
accagcggagagtag
DBGET
integrated database retrieval system