Pandoraea faecigallinarum: AB870_02950
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Entry
AB870_02950 CDS
T03972
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pfg
Pandoraea faecigallinarum
Pathway
pfg03030
DNA replication
pfg03410
Base excision repair
pfg03420
Nucleotide excision repair
pfg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB870_02950
03410 Base excision repair
AB870_02950
03420 Nucleotide excision repair
AB870_02950
03440 Homologous recombination
AB870_02950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfg03032
]
AB870_02950
03400 DNA repair and recombination proteins [BR:
pfg03400
]
AB870_02950
Enzymes [BR:
pfg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB870_02950
DNA replication proteins [BR:
pfg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AB870_02950
DNA repair and recombination proteins [BR:
pfg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AB870_02950
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB870_02950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AKM29312
UniProt:
A0A0H3WNK6
LinkDB
All DBs
Position
complement(3314783..3317521)
Genome browser
AA seq
912 aa
AA seq
DB search
MSEQQSLEGKTLLLVDGSSYLYRAYHALPDLRGPSGEPTGALHGIVNMLRRMRKDVHAEY
SACVFDAKGKTFRDDWYPQYKANRPSMPEDLRAQIEPIHEAVRAMGWPLLMIDGVEADDV
IGTLARQAAQRGMRVVVSTGDKDLAQLVNDRVTLVNTMTNETLDAAAVTAKFGVPPERIV
DYLTLVGDTVDNVPGVEKCGPKTAVKWLTQYGDLDNLLANAAQVKGAVGDNLRRALDWLP
MGRKLVTVALDCDLAPQVTSIEASLQTQPEDAEVLRDFFSRHGFKTLLREAEAAVASQAG
EPAPAPVADTIERQYDAVLTWEQFDAWLKTVEAAELTAFDTETTSLDAMQAQLVGLSFSC
EPGRAAYIPVAHRAPGEVEQLPRDEVLARLKHWLESPDHKKVGQNLKYDAHVLENYGIKL
GGIAHDTLLQSYVLESHRSHDMDSLASRHLGVTTVKYEDVCGKGAKQIGFDEVTIERATE
YAAEDADITLRLHRALYPDVAREATLEFVYRDIEMPTARVLQRMERNGVLVDAARLAAQS
DEIGRKLVTLENEAYTLAGQQFNLNSPKQIGDIFFTQLQLPVVKKTASGAPSTDEEVLQK
LAEDYPLPKVLLEYRGLAKLKSTYTDKLPKMVNPATGRVHTNYAQAVAITGRLASNDPNL
QNIPVRTAEGRRIREAFVAPPGSQLVSADYSQIELRIMAHISGDESLLRAFANGEDIHRA
TAAEIFAVTPLEVSSEQRRYAKVINFGLIYGMSAFGLAANLGIERDAAKQYIDRYFMRYP
GVARYMDETRKSAKARGYVETVFGRRLWLPDINGGNGPRRQAAERAAINAPMQGTAADLI
KLSMIAVQRWLDDSGLQTRQIMQVHDELVLEVPDHELAEVRKRLPELMCSVAKLKVPLVA
EVGVGENWEQAH
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacagcaaagtctggaaggtaagacgctcttattggtcgatggttcgagttac
ctctatcgagcctatcacgccctgccggatttgcgcggccccagcggcgaacccaccggc
gcgctgcacggcatcgtcaatatgctgcgccgcatgcgtaaagacgttcacgcagagtac
agcgcttgcgttttcgatgcaaagggcaagacctttcgcgacgactggtatccgcagtac
aaggccaatcgcccgtcgatgccggaggatctgcgcgcgcagatcgaaccgattcacgaa
gcggtgcgcgcgatgggctggcccttgttgatgatcgatggcgtggaggccgacgacgtg
atcggcacgctggccagacaggcggcgcagcgaggcatgcgcgtggtcgtctcgaccggc
gacaaggaccttgcgcaactcgtgaacgatcgcgtgacgctggttaacacgatgaccaac
gaaacgctcgacgccgccgctgttaccgcgaaattcggcgtgccgcccgagcgcatcgtc
gattacctgacgctggtgggcgacaccgtcgacaacgtgccaggcgtcgaaaaatgcggg
ccgaagacggccgtcaaatggctcacgcaatacggcgatctggacaacctcctggcgaat
gccgcgcaagtgaagggcgccgtcggcgataacctgcgccgcgcgctcgactggctgccg
atggggcgcaagctcgtgacggtggcgctcgactgcgatctcgcgccacaggtcacctcc
atcgaggcgagcctgcaaacgcagcctgaagacgccgaagtcctgcgtgacttcttctcg
cgccacggcttcaagacgctgcttcgcgaagcggaagccgccgttgcctcgcaggccggc
gaaccagcgcccgcgccggtggccgacaccatcgagcgtcagtacgatgcggtgctcaca
tgggagcagttcgatgcgtggctcaagactgtcgaagccgccgaactgacggcgttcgat
acggaaaccacgtcgctcgacgcgatgcaggcgcaactcgtcggcctctcgttttcctgt
gagccggggcgcgccgcatacattcccgtcgcgcaccgtgcaccgggcgaagtggagcag
ttgccgcgcgacgaagtgctggcgcgcctgaagcactggctcgagagcccggatcacaag
aaggtcggacagaacctcaagtacgatgcgcacgtgctcgagaactacggcatcaagctc
ggcggtatcgcacacgacacgctgctgcaatcgtacgtgctcgaatcgcatcgcagtcac
gatatggacagtctcgcgtcgcgccatctcggtgtgacgaccgtgaagtacgaagacgtt
tgcggcaagggggcaaagcagatcggcttcgacgaagtcacgatcgagcgcgccaccgaa
tacgcggcggaggatgccgacattacgttgcgtctgcaccgtgcgctgtatccggacgtc
gcccgtgaagccacgctcgaattcgtctatcgcgatatcgaaatgccgaccgcgcgcgtg
ctccagcgcatggagcgcaatggcgtgctggtggatgcggcgcgtctggcggcacagagc
gacgagatcggccgcaagctcgtgacgctggaaaacgaggcgtacacgctggccggacag
cagttcaacctgaattcgccgaagcagatcggcgacattttcttcacgcaactgcaattg
ccggtcgtcaagaagaccgcgagcggagcgccgtcgaccgacgaagaagtgttgcagaag
ctggccgaggactatccgctgccaaaggtgttgctggagtatcgcggccttgccaagctg
aagtccacgtacaccgacaaactgccgaagatggtcaatccggcgacaggccgcgtgcat
acgaactacgcgcaggccgtggcgatcacgggccgtctggcgtcgaacgatccgaacttg
cagaacattcccgtgcgtaccgccgaaggccgccgcattcgcgaggcgttcgtcgcgccg
ccgggcagccagctggtgtcggcggattactcgcagatcgagttgcgcatcatggcgcac
atctcgggagacgaaagtcttctgcgcgcattcgccaacggcgaggacattcaccgtgcg
accgctgcggagatcttcgccgtcaccccgcttgaagtctcctcggagcagcgccgctac
gccaaggtcatcaatttcggcctgatctacggcatgagcgcgttcgggctcgcggcaaac
ctcggcatcgagcgcgacgcagccaagcagtacatcgaccggtacttcatgcgttatccg
ggcgtggcgcgttacatggatgagacgcgcaagagcgcgaaggcacgcggctacgtcgag
accgtgttcggccgtcgcctgtggctgccggacatcaacggcggtaacgggccgcgtcgt
caggcggccgagcgcgccgccatcaacgcgccgatgcagggcacggccgccgacctcatc
aagctttccatgattgctgtgcagcgctggctggacgacagcggcttgcagacgcgccag
atcatgcaggtgcacgacgaactggtgctcgaagtgccggatcacgaactcgcggaggtg
cgcaagcgtctgccggaactgatgtgcagcgtggcgaagttgaaggtgccgctcgtggcc
gaagtcggtgtgggcgaaaattgggagcaggcgcactga
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