Paracoccus fistulariae: JHX87_05410
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Entry
JHX87_05410 CDS
T08856
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
pfis
Paracoccus fistulariae
Pathway
pfis00190
Oxidative phosphorylation
pfis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfis00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
JHX87_05410
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JHX87_05410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfis03019
]
JHX87_05410
Enzymes [BR:
pfis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
JHX87_05410
Messenger RNA biogenesis [BR:
pfis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JHX87_05410
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
WCR08253
LinkDB
All DBs
Position
complement(1093176..1095341)
Genome browser
AA seq
721 aa
AA seq
DB search
MTQSDFLRNEFPEPLELPDGPPTGAERFFNRELSWLSFNWRVLDEARNPRVPLLERLRFV
SISATNLDEFYTVRVAGLRELVREGSTIPSDDGRSPAEQLSLINTDARHLMRAQQAVWNH
LRREMEAAGIVILSRDWLTEADEQFLHDYFDSKVFPVLSPLAIDPAHPFPFIPNAGFSLA
LQLARDTDGRQMQALLPIPAQLRRFVPLPGGQRFLPLEELLLMHLSSLFPGYRDTGHCAF
RVLRDSDLEVEEEAEDLVREFETALKRRRRGSVIRLKITTGAPKQMRRLIMEELEVSPDE
VIDVEGLLGMADLNELVLDSRRDLLWPSFTPRVPERVQDHGGNMFSAIQQKDMLLHHPYE
TFDMVVRFLQQAARDPDVLAIKQTLYRTSRDSPIVEALCEAAEAGKSVTALVELKARFDE
AANIRQSRRLERAGAHVVYGFVNYKTHAKISTVVRREGENLVTYTHYGTGNYHPITARIY
TDLSLFTCDRSLGRDATKVFNFLSGYVQPAGLENISISPNDLKEKLLSLIAKEADHARQG
RPAAIWAKMNSLIEKDVIEALYAASAAGVKISLVVRGICGIRPGIKGLSENIRVKSIIGR
YLEHSRIICFGNGHDLPSKKARVFISSADWMERNLSRRVETLVECMNDTVKAQIVSQIMA
ANMADEAQSWLLQPNGRFVRYLPENRGDLFNCHRFFMENPSLSGRGKAGARDVPALTHSS
D
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgacccagtcagattttttgcgtaacgaattccccgaaccgctggaacttcccgatggc
ccgccgaccggcgccgagaggttctttaaccgagagctgagctggctcagcttcaactgg
cgcgtgctggacgaggcgcggaacccaagggtgccgctgctggaacgtctgcgctttgtc
tcgatcagcgcgaccaatctggacgaattctacaccgtccgcgtcgcaggcctgcgcgaa
ctggtccgtgagggcagcaccatcccgtccgacgatggccgcagcccggcggaacagctg
tcgctgatcaataccgatgcgcgtcacctgatgcgcgcgcagcaggcggtctggaaccac
ctgcgccgcgagatggaggcggcaggcatcgtcatcctgtcgcgcgattggctgaccgag
gcggatgagcagttcctgcacgattatttcgacagcaaggtgttcccggtgctgtcgccg
ctggcgatcgacccggcccatcccttcccgttcatcccgaatgcgggcttttcgctggcg
ctgcaactggcccgtgacaccgatggccggcagatgcaggcgctgttgccgatcccggcg
cagctgcgccgctttgtgccgctgccgggggggcagcgcttcctgccgctggaagaattg
ctgctgatgcatctgtccagcctgttccccggctatcgcgataccggccattgcgccttc
cgcgtgctgcgcgacagcgatctggaggtcgaggaagaggccgaggatctggtccgcgaa
ttcgagacggcgttgaaacggcgccgtcgcggcagcgtcatccggctgaagatcaccacc
ggcgcacccaagcagatgcgtcggctgatcatggaggaactggaggtcagcccggacgag
gtcatcgacgtcgaaggtctgctgggcatggcggatctgaacgaactggtgctggacagc
aggcgcgaccttctgtggccctcattcacgccacgggtgccggaacgggtgcaggatcac
ggcggtaatatgttctcggcgatccagcaaaaggacatgttgctgcatcacccctatgag
accttcgacatggtggtgcgctttctgcagcaggcggcgcgcgatcccgatgtgctggcg
atcaagcagacgctgtatcgcaccagccgcgacagccccattgtcgaggcgctgtgcgag
gccgccgaggcgggcaaatccgtcacggcgctggtcgagttgaaagcccgtttcgacgag
gccgccaatatccgccagtcccgcaggctggagcgtgcgggcgcgcatgtcgtctatggt
ttcgtgaattacaagacccatgccaagatcagcaccgttgtccggcgcgaaggtgaaaac
ctggtcacctatacccattacggcaccggcaattatcacccgatcacggcgcggatctat
accgatctgtcgctgttcacctgcgaccgctctctgggtcgggatgcgaccaaggtgttc
aatttcctgtccggctatgtccagcctgcggggctggaaaacatctcgatctcgcccaat
gatctgaaggaaaagctgctgtcgctgatcgcgaaagaggccgatcatgcccggcaggga
cgcccggcggcgatctgggccaagatgaattcgctgatcgaaaaggacgtgatcgaggcg
ctttatgccgccagcgccgccggggtcaagatcagcctggtcgtgcgcggcatttgcgga
ataaggccgggtatcaagggcttgtcggaaaatattcgcgtcaaatcgatcatcgggcgc
tatctggaacattcccgcatcatctgtttcggcaacggacatgacctgccgtcgaaaaag
gcgcgggtctttatcagttccgctgactggatggagcggaacctgtcccgccgcgtggaa
acgctggtcgaatgcatgaacgacaccgtcaaggcgcagatcgtcagccagatcatggcg
gccaatatggccgatgaggcgcaaagctggctgttgcagcccaatggccgtttcgtgcgc
tatctgcccgaaaaccgcggggatttgttcaactgtcaccgtttcttcatggaaaacccg
tcactctcgggccggggcaaggcgggggcgcgcgatgtgcccgcgctgacccattcttcc
gattga
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