Paracoccus fistulariae: JHX87_16405
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Entry
JHX87_16405 CDS
T08856
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pfis
Paracoccus fistulariae
Brite
KEGG Orthology (KO) [BR:
pfis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfis03009
]
JHX87_16405 (rimO)
Enzymes [BR:
pfis01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JHX87_16405 (rimO)
Ribosome biogenesis [BR:
pfis03009
]
Prokaryotic type
ribosomal protein modification factors
JHX87_16405 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
DUF1732
Motif
Other DBs
NCBI-ProteinID:
WCR07021
LinkDB
All DBs
Position
3317511..3318875
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AA seq
454 aa
AA seq
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MSLNPPIIRPDLARATIPEERRAGQPTIGMVSLGCPKALVDSERILTRLRAEGYAISPDY
AGADAVIVNTCGFLDSAKAESLDAIGEALAENGRVIVTGCLGAEPDYITGAHPKVLAVTG
PHQYESVLDAVHGAVPPAPDPFIDLLPASGVSLTPRHYSYLKISEGCNHKCKFCIIPDMR
GRLVSRPAHAVMREAEKLVEAGVKELLVISQDTSAYGVDRKFAEERGHRAHITDLARDLG
GLGAWLRLHYVYPYPHVRDLIPLMAEGLVLPYLDIPFQHAHPDTLKRMARPAAAAKTLDE
IAAWRAICPEITLRSTFIVGYPGETEAEFQTLLDWLDEAQLDRVGAFQYENVAGARANDL
PDHVPAEVKQDRFDRFMEKAQAISEAKLAAKVGQRIEVIVDEVDAEGATCRTKADAPEID
GNLFIDEGFQDLKPGDIVSVTVDEAGEYDLWGRL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgaacccgcccatcatccgccccgatcttgcccgcgccacgatccccgaggaa
cgccgcgccggacagcccaccattggcatggtcagccttggctgtcccaaggcgctggtc
gacagcgaacggatcctgacccgcctgcgggccgagggctatgcgatcagccccgattat
gcgggcgccgatgcggtgatcgtgaacacctgcggctttctggacagcgccaaggccgaa
tcgctggacgcgattggcgaggctttggccgaaaacgggcgggtgatcgtcacaggctgt
ctgggggccgagccggactatatcaccggcgcccatcccaaggttctggccgtcaccggc
ccgcatcaatatgaatcggtgctggatgccgtgcatggtgccgtgccgcccgcgcccgat
ccctttatcgacctgctgcccgcatccggcgtcagcctgacaccgcggcattacagttat
ctcaagatttccgagggctgtaatcacaaatgcaagttctgcatcatccccgatatgcgc
gggcgtctggtcagccgaccggcccatgccgtgatgcgagaggccgaaaagctggtcgag
gccggggtcaaggagttgctggtcatcagtcaggacacctcggcctatggtgtcgatcgc
aaattcgccgaagagcgtggccaccgcgcccatatcaccgatctggcccgcgatctgggc
ggacttggggcgtggctgcggctacattacgtctatccctatccgcatgtgcgcgacctg
atcccgctgatggccgaggggctggtgctgccctatctggacatccccttccagcatgcc
catcccgatacgctgaagcgcatggcacgccccgccgctgccgcaaagacgctggatgag
atcgccgcctggcgcgcgatctgccccgagatcacgctgcgctcgacctttatcgtcggc
tatccgggcgaaaccgaggccgagttccagaccctgctggactggctggacgaggcgcaa
ctggatcgtgtcggggcgttccaatatgaaaatgtcgcgggtgcccgcgccaatgatctg
cccgatcacgtcccggccgaggtgaagcaggaccgcttcgaccgcttcatggaaaaggcg
caggcgatttccgaggccaagctggccgccaaggtcggtcagcggatcgaggtgatcgtg
gatgaggtcgatgccgaaggcgcgacctgccgcaccaaggccgatgctccggaaatcgat
ggcaacctgttcatcgacgaaggttttcaggatctgaaacccggcgatatcgtcagcgtg
accgtggatgaggcgggcgaatatgatctgtggggccgtctttga
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