Pseudomonas fitomaticsae: KJY40_01260
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Entry
KJY40_01260 CDS
T08740
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit03030
DNA replication
pfit03410
Base excision repair
pfit03420
Nucleotide excision repair
pfit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KJY40_01260 (polA)
03410 Base excision repair
KJY40_01260 (polA)
03420 Nucleotide excision repair
KJY40_01260 (polA)
03440 Homologous recombination
KJY40_01260 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfit03032
]
KJY40_01260 (polA)
03400 DNA repair and recombination proteins [BR:
pfit03400
]
KJY40_01260 (polA)
Enzymes [BR:
pfit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KJY40_01260 (polA)
DNA replication proteins [BR:
pfit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KJY40_01260 (polA)
DNA repair and recombination proteins [BR:
pfit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KJY40_01260 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KJY40_01260 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
UFQ00343
LinkDB
All DBs
Position
complement(275160..277964)
Genome browser
AA seq
934 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDEMYAEYKANRPSMPDDMRLQIEPLHQSVKALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVIISTGDKDMAQLVDGHITLVNTMSGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYAQLDIVPSLPIRGAKTLPAKLEEHKEM
AFLSYQLATIKVDVPLDIGLDDLQMGPEDSAKLLELYTLLEFKSWINDLERDAKRLELSA
ATEPAPAGDLFSAPAEEAPAAPAEAAYETILDQARFDVWLEKLKNARLFAFDTETTGIDA
QQAQLVGLSFAVQANEAAYIPLTHSYIGVPEQLDRDTVLRALKPILEDPSKLKVGQHAKF
DMNILANCAIGGDQNEGITVRGIAFDTMLESYVLNSTATRHDMDSLAQKYLDHTTVSFQD
IAGKGAKQLTFDQIALEQAGPYAAEDADVTLRLHQTLFEKLSAIPSLASVLTDIEIPLVP
VLARIERQGAFVDAELLGIQSIELGNKMVALEREAFEIAGEEFNLGSPKQLGVILYEKLG
LPVLKKTAKGQPSTAEEVLAKLAEDDHRLPKVLMEHRSMNKLKSTYTDRLPEQINPRTGR
IHTSYHQAVASTGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIM
AHLSRDEGLMNAFRNNLDVHTATAAEVFKVELNEVTSDQRRGAKAINFGLIYGMGAQKLG
KDIGVDTKTAKAYIDTYFARYPGVREYMDRTRAQAADQGFVETIFGRRLYLPDINSNKPQ
ERAAAERTAINAPMQGTAADIIKKAMVAVDNWLSASGLDAKVILQVHDELVLEVREDLVD
QVREEIRVHMSEAAKLDVPLLVEVGVGNNWDEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcgtcttacctgtaccgcgcctttcac
gcgctgccaccgctgaccacctccaaaggcctgccgaccggtgcggtcaaaggcgtgctg
aacatgctcaagagcctgcgcaagcagtatcccgatagcccgttcgccgtggtgttcgac
gccaagggtgggacatttcgcgatgagatgtacgccgaatacaaggccaaccgcccgagc
atgcccgacgacatgcgtctgcagatcgaaccgctgcaccagagcgtaaaagccctcggt
ttcccgttgctgtgcgtcgaaggcgtcgaggccgatgacgtgatcggcaccctggcccgc
agcagcgcggccgccgatcgcccggtgatcatctccaccggcgacaaggacatggcgcaa
ctggtcgacggccacattaccttggtcaataccatgtccggtagttcgatggacgtggaa
ggcgtgaaggagaaattcggcgtcgctccagagcagatcatcgattatctggccctgatg
ggcgattcttccgacaacatccccggcgttcccggcatcggtccgaagaccgcgtccggc
ctgttggtgggcgtcaacggcggtctgaccgagctgtacgcgcagctcgacatcgtgccg
agcctgccgattcgtggcgccaagaccctgccggccaagctcgaagagcacaaggagatg
gccttcctctcctatcaactggcgaccatcaaggtcgacgtgccgttggatatcggcctc
gacgacctgcaaatgggcccggaagattcggccaaactgcttgagctttacaccctgctg
gagttcaagagctggatcaacgatctggagcgggacgccaagcgtctggagctgagcgct
gccaccgagcctgcgccggccggcgatctgttcagcgcgcctgcggaagaagcgcctgcc
gctccggctgaagccgcgtacgaaaccatcctcgatcaggcgcgattcgacgtttggctg
gaaaagctgaagaacgccaggctgtttgccttcgacaccgaaaccaccggtatcgacgcg
cagcaggcacaactggtcggcttgtctttcgcggtgcaggccaacgaagcagcctacatc
ccgctgactcactcctacatcggcgtgccggagcagctggatcgcgacaccgtgctgcgc
gcgctcaagccgatcctcgaagacccgagcaagctcaaggtcggccagcacgccaagttc
gacatgaacatcctcgccaactgcgccatcggtggcgatcagaatgaaggcatcactgtg
cgcggaattgccttcgacacgatgcttgagtcctacgtgctcaactccaccgccacccgt
cacgacatggacagcctggcgcagaagtacctggatcacaccaccgtgagcttccaggac
atcgccggcaaaggcgccaagcaactgaccttcgaccagatcgctctggaacaggccgga
ccgtacgccgccgaagatgccgacgtgaccctgcgtctgcaccagacgctgttcgaaaaa
ctcagcgccatcccgagcctggccagcgtgctgaccgatatcgagatcccgctggtgccg
gtgctcgctcgtatcgagcgccaaggcgcgttcgtcgacgctgagctgctcggcatccag
agcattgagctgggcaacaagatggtcgcgctggagcgtgaagcgttcgagatcgccggt
gaagaattcaacctcggttcgccgaagcaactgggcgtgatcctctatgaaaaactcggc
ctgccggtcctgaagaaaaccgccaagggccagccgtccaccgccgaagaagtgctggca
aaactggccgaagacgatcaccgcttgccgaaagtgctgatggaacaccgttccatgaac
aagctgaagagcacctacaccgatcgcctgccggagcagatcaacccgcgtaccgggcgt
atccacacctcgtaccatcaggccgtcgcgtcgaccgggcgcctgtcatcgagcgacccg
aacctgcagaacattccggtgcgcaccgctgaaggccgacgcatccgccaggcctttgtc
gcgccgaaaggctacaaactgctggcggcggactactcgcagatcgaattgcggatcatg
gcgcacctgtcccgcgacgaaggcctgatgaacgccttccgcaacaacctggacgtgcac
accgccacggcggcggaagtgttcaaggtcgagctgaacgaagtgacgtccgatcagcgc
cgtggcgccaaggcgatcaacttcggtctgatctacggcatgggcgcgcagaagctgggc
aaggacatcggcgtcgataccaagaccgccaaggcctacatcgacacctacttcgcgcgt
tacccgggcgtgcgtgaatacatggatcgcacccgcgcccaggcagcagaccaaggcttt
gtggaaacgatcttcggtcgtcgcctgtatctgccggacatcaactccaacaagccgcag
gaacgcgctgccgccgagcgcacggcgatcaacgcgccgatgcaaggcaccgcagcggac
atcatcaagaaagccatggtggcggtggataactggctgagcgcttccgggctggacgcc
aaagtcatcctgcaggtgcacgacgaactggtgctggaggttcgcgaggatctggtcgat
caggttcgcgaagaaattcgtgtgcacatgagcgaggcggcaaaactggacgtgccgttg
ctggtggaagtaggggttggcaacaactgggacgaggcgcactga
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