Pseudocercospora fijiensis: MYCFIDRAFT_58269 Help Entry MYCFIDRAFT_58269  CDS       T03109                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism pfj  Pseudocercospora fijiensis Pathway pfj03020   RNA polymerase pfj03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pfj00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     MYCFIDRAFT_58269   09124 Replication and repair    03420 Nucleotide excision repair     MYCFIDRAFT_58269  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pfj03021]     MYCFIDRAFT_58269    03400 DNA repair and recombination proteins [BR:pfj03400]     MYCFIDRAFT_58269 Enzymes [BR:pfj01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      MYCFIDRAFT_58269 Transcription machinery [BR:pfj03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      MYCFIDRAFT_58269 DNA repair and recombination proteins [BR:pfj03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       MYCFIDRAFT_58269 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Motif Other DBs NCBI-GeneID:  19340441 NCBI-ProteinID:  XP_007925888 JGI:  58269 UniProt:  M3B0A6 LinkDB All DBs Position Unknown AA seq 1753 aa AA seqDB search MATFPHSSAPLKTVQEIQFGLFSPDEIKSMSVCHIEYAETMDEQRHRPREKGLNDPKLGT IDRSQMCATCGESQQECPGHFGHIELAVPVFHVGFITKIKKILESVCHNCGKLLEDESNP LFKRAVGLRDPKRRFEAVTRLCKPKMTCDLDAKNDDEQEDFGSNPKKEKRPGHGGCGNIQ PTIRKEQLKLNGTWKLGKNEDGEDNGVEKKIITPQEVLRVFGLISEDDLLRLGLNVDYAR PEWMVLTVLPVPPPAVRPSISVDGTSQGMRSEDDLTYKLSDIIRANSNVRRAEQEGSPQH ITDEFTSLLQYHVATYMDNDIAGMPKSIQKSGRPLKAIRARLKSKEGRLRGNLMGKRVDF SARTVITGDPNLDLDQVGCPRSTARILTFPERVTLYNIHKLQELVRNGPNEHPGAKHIIR EDGSRIDLRYHKRAGEIQLQLGWIVERHIVDGDYIIFNRQPSLHKESMMGHRVKVMPYST FRLNLSVTSPYNADFDGDEMNMHVPQGHETRAEVANLCAVPHNIVSPQKNGPLMGIVQDT MAGIWMMTRRDTMMDYEQVMNILMWVPGWDGVIPTPAILKPSPRWTGKQIISLGLPLGLN IFRKSEEGDIPLLEKEEPVLIQNGELVWGRFTKKLVGASGGGVVHYIFNDKGPDATVEFF NAAQRICCYWLLHHGFSVGIGDTVPDADLVAKIEEQVVKYKTQVEEYMSEVQIDNMEASP GMTVRETFENKTKTALDNARNGAGDVAYKGMNACNNVGTMVKSGSKGSTTNVSQMTAAVG QQSLEGKRLPFGFKDRVLPHFPKDDYSPASRGFVENSYLRGLTPQEFFFHAMGGREGLID TAVKTAETGYIQRRLVKALEEIMIKYDGTVRNSLGDILQFTYGEDGLDATYIEAQNLEII TSSNEAFEKKYKIDVISPSSKDQTLTSNYLEVANELSGDVEVQQLFDEEFEAIKHDRAKI RQNLDDADDRRFLPLNVGRMIANARNKFKINDNSKSDLDPREVIPKVRSLLDRLKIIRGD DELSKEADLNATLLCKALFRSRLAFKRLVKEDKLSKLALDNILGDIENRFLRALVSPGEM VGVLAAQSIGEPATQMTLNTFHLAGVTAKTTTKGVPRLKEILNVADNIKTPNMKVYQLPE ARAAQDSAKLLRSKVEFTSLRGVTDAAEIYYDPDIESTVIDEDRDMVESYFIIPEEGADS PDAQSRWLLRFVLGRRQLLDKGLTVTQVAQKIKEVYTSDIAVIFSDDNAEQTVVRVRMLN RGDKDEEGDESSEDDTLKQLAEHMLDNVILRGVNGVRRVFVSKANQIIEKPNGAMTQGGE ESVEWYLDTDGVNLQKVLAVDGVDSARTTCNHFQSTMKVFGIEAVRASLMAEMKDVLTND GSYVNHRHMAILCDVMCARGELMAVTRHGINRSDTGALMRCSFEETVEILFDAASSGELD DCRGVSENIILGQLAPSGTGEFDMLLDSNMLSTVTATQRPMQVGAAGGAMSPMSDGSMTP YDMGSPMSESGGIAGPDYGASFSPIINPGQDEGGGLTAYGGGYDGGVSPYRGGISPGYAP QSPFSGGFSPSSPGYAGGYSPTSPGGYSPTSPGGALTSPAYAMTSPAYSPQSPAYQPTSR RRSRRALAPRSHPQVPHIPQHRRVIPQHRRVTVQPVPLDQQATSIRQLVPRTHHPRRRFP LEQQATSTAQLARLSVHPRLLGVREVVALLRPARPSTHRQVRHIRTQDLISLALPRQMIS SLPLPRKMDRWPV NT seq 5262 nt NT seq  +upstreamnt  +downstreamnt atggcaaccttccctcactcctcagcgccgctcaagacggtgcaggagattcaattcggt ctcttctcgcccgatgaaatcaagagcatgagcgtgtgccatatcgaatatgccgagact atggacgagcagcgccaccgaccgcgtgagaagggcttgaatgaccccaaactcggcacc atcgatcgcagccagatgtgcgctacctgcggcgaaagccaacaggagtgtcctggtcat ttcgggcacatcgaacttgctgtgcccgtcttccatgtcggcttcatcaccaagatcaag aagatccttgaatccgtttgccacaattgtggtaagctcttggaagatgagagcaaccct ctgttcaaaagagccgtcggactgcgagatcccaagcgccgtttcgaggccgtcacccgc ctatgcaaacccaagatgacctgcgatctcgatgccaagaacgatgacgagcaggaagat ttcggctccaacccaaagaaggagaagcgcccagggcacggcggttgcggcaatattcag ccaaccattcgaaaggagcagttgaagctgaatggcacctggaaactcggcaagaacgaa gatggtgaggacaatggtgtcgagaagaaaatcatcacacctcaagaagtactccgtgtt ttcggcctgatctcagaggacgaccttctccgtctgggattgaacgtcgattatgcccgt ccggagtggatggtcctgacagtacttcctgtcccaccgccggcagtccgtcctagtatc tcggttgacggaaccagccaaggcatgcgatcggaagacgacttgacatacaagctgtct gatatcattcgcgccaattcgaatgtgcgacgcgccgagcaggaaggctcaccgcagcac attaccgatgaattcacgtctctcttgcagtaccatgttgcgacctacatggacaatgat attgctggtatgcccaagtcgattcagaagtctggtcgtcctctcaaggctattcgcgct cgtctgaagtccaaggagggtcgtctccgaggcaacctgatgggcaagcgtgtcgacttc tctgcacgtactgtcattaccggtgatcccaacttggatctcgaccaagtcggatgtccg cggtctacagccagaatccttacattcccggaacgagttacactctacaacatccacaag ctgcaagagcttgtgcggaacggtccaaatgagcacccaggagccaagcacatcatccga gaagacggttctcgtatcgacttgcggtaccacaagcgagctggcgagattcagctgcaa cttggctggattgtcgaacgccatatcgtcgacggagactacatcattttcaaccgacag ccttctctccacaaagagtccatgatgggtcatagggtgaaggtgatgccttactctacc ttccgtctcaatctgtcggtcacatccccatacaacgccgatttcgatggcgacgagatg aacatgcacgttcctcagggccatgaaactcgtgccgaggtggccaacctgtgtgctgtt cctcacaatattgtttctcctcagaagaacggaccgctcatgggaattgttcaagacacc atggccggtatctggatgatgacgagacgtgataccatgatggattatgagcaagtcatg aacatcttgatgtgggtgcccggttgggacggtgtcattccgactcctgctatcctcaag cctagcccacgctggactggcaagcagataatatcacttggccttccgcttggactgaac attttccggaagagcgaggagggcgatattcccttgctagagaaagaagagcccgtcctc atccagaatggtgagcttgtctggggccgctttacaaagaagctggtcggcgcttccggt ggcggtgtcgtacactacatcttcaacgacaagggtccggacgctacggtcgagttcttc aacgctgcgcagcgcatctgctgctactggttgcttcatcatggctttagcgttggcatt ggcgatactgtcccagatgccgatctggtcgccaagatcgaggaacaagtcgtcaagtac aagacgcaggtcgaggagtacatgagcgaggtgcaaattgataacatggaggcttcgcca ggtatgacggtccgtgagacatttgagaacaagacgaaaactgcgctcgacaatgcccga aacggagctggtgacgtggcttacaagggcatgaatgcctgcaacaacgtcggtaccatg gtcaaatccggatccaagggctctacaacgaacgtctcccagatgactgcagcagtcgga caacagtctcttgaaggcaagcgtcttccattcggcttcaaggaccgcgtgcttccgcac tttcccaaggatgactattcaccagcatcccgcgggtttgtggagaactcctatctacgg ggactgacaccacaagagttcttcttccacgccatgggaggtcgtgaaggtctcattgac actgctgtcaagactgctgagactggctacattcagcgtcgacttgtcaaagcactcgaa gaaatcatgatcaagtatgatggtaccgtacgcaactcactcggcgacattctacagttc acgtatggtgaggatgggctcgatgctacatacatcgaagcacagaatcttgagatcatt acttcgtctaacgaggctttcgagaagaagtacaagatcgatgttatcagccctagcagc aaggatcaaaccttgacctcaaattacctggaggttgcgaacgagctgtcaggagatgtt gaagtccagcagctttttgatgaagaatttgaagccatcaaacacgatcgtgcgaagatt cggcagaatctcgacgatgctgatgatcgccgcttcctaccattgaatgttggtcgtatg atcgcgaacgcgaggaataagttcaagatcaacgataacagcaagagcgaccttgaccct cgggaagtaatccccaaagttcgatctcttctggaccgcctcaagatcattcgcggagat gacgagctgtccaaggaggctgacttgaatgctacgctcctgtgcaaagccctcttccgc tcccgtttggcgttcaagcgacttgtcaaggaagacaagctcagcaagcttgcgctcgac aacatccttggcgacatcgaaaatcgcttcttgcgcgctcttgtcagcccgggtgagatg gttggtgtgctcgctgcgcaatccatcggagagccagccactcagatgacgctgaacaca ttccatttggcaggagtcacggcgaagaccaccaccaagggtgtaccgcgtctgaaagaa atcttgaacgtggctgacaacatcaagacgccgaatatgaaagtgtaccagctgcccgag gcacgcgctgcccaagactctgcgaagctgcttcgctccaaagtcgaattcacaagcctt cgtggagttaccgatgccgctgagatctactacgatccggacatcgagagcaccgtcatc gatgaagatcgagacatggtggaatcctatttcatcatcccagaggagggcgctgactct cccgatgcgcagagtcgatggctcctccgctttgtcctgggacgtcgacaactgcttgac aagggcttgacagtcactcaggttgcccagaagattaaggaggtgtacacctctgatatt gctgtcatcttctccgacgacaacgctgagcaaacggtggttcgtgttcgcatgttgaac cggggcgacaaggacgaggaaggtgatgagtcatcggaggatgacaccctgaaacagctt gccgagcacatgcttgacaatgtcatccttcgcggtgtgaacggtgttcgccgtgtcttc gtctccaaggccaaccagatcatcgagaagccgaatggtgcgatgacccagggtggcgag gaaagcgtggaatggtacttggacaccgatggtgttaatctgcagaaggttttggcagtt gacggcgttgactccgctcgcacgacctgcaaccacttccagtcgactatgaaagtgttc ggcattgaagctgtccgtgcttctctgatggcagagatgaaggacgtgttgactaacgac ggttcttacgtcaaccatcgccacatggcaattctttgcgacgtcatgtgcgcgagagga gagttgatggctgttactcgtcacggtatcaaccgctcggacactggtgcattgatgcgc tgttctttcgaagagaccgtcgaaatcttgttcgatgctgcatcttcaggcgaactggat gactgccgtggtgtttccgagaatataattctcggtcaactggcgcccagcggcactggt gagttcgacatgcttctcgacagcaacatgctatcaacagtcaccgccactcaacgtcca atgcaagtcggtgctgccggcggggcaatgtcaccaatgtcagacggatctatgactcca tacgatatgggctcaccaatgtccgagagcggcggaattgctggtccagactatggagcc agcttctcgccaatcatcaaccctggccaagatgaaggcggtggtcttactgcttacggt ggaggttacgatggcggcgtgagcccgtaccgtggaggaatttctcccggatatgcgcct cagagtccattctcgggtggcttctcgccctcgtcgcccggttacgctggaggctatagt cccaccagtcccgggggatatagcccgaccagtcctggtggcgccttgacctcccctgcc tacgcgatgacaagccctgcatactcaccccaaagccctgcgtatcaaccgacgtctcgc cgtcgttctcgccgggctctggctccaaggtctcacccacaagtccctcatattccccaa catcgccgagttattccccaacatcgccgagttacagtccagccagtccctttggatcag caagcaacaagtattcgccaactagtccctcgtactcaccatcctcgccggcgttttccc ctggagcagcaagcaacaagtacagcccaactagcccggctttcagtccatcctcgcctg cttggagtgcgcgaggtggtggcgctccttcggcccgctcgcccgtctactcaccgtcaa gtccggcatatcagaactcaggatctgatcagtttagcccttcctcgccaaatgatcagt tctctccctcttccccgaaagatggatagatggccagtgtaa

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