Pseudomonas frederiksbergensis: PFAS1_05370
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Entry
PFAS1_05370 CDS
T04786
Name
(GenBank) GGDEF-domain containing protein
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFAS1_05370
Enzymes [BR:
pfk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PFAS1_05370
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
FtsL
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
APV38793
UniProt:
A0A1H4W4L1
LinkDB
All DBs
Position
1093977..1096028
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AA seq
683 aa
AA seq
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MKLELKNSLSVKLLRVVLLSALIVGVVLSCAQIVFDAYKTRQAVASDAQRILDMFRDPST
QAVYSLDREMGMQVIEGLFQDDAVRKASIGHPNEAMLAQKSRELQHSDSRWLTDLILGKE
RTFTTQLVGRGPYSEYYGDLNITLDTATYGQGFIVNSVIIFISGVLRAMAMGLVLYLVYH
WLLTKPLSRIIEHLTEINPDRPSEHKIPLLKGHEKNELGIWINTANQLLESIERNTHLRH
EAENSLLRMAQYDFLTGLPNRQQLQQQLDKILVDAGKLQRRVAVLVVGLDDFKGINEQFS
YQTGDQLLLALADRLRAHSGRLGALARLGGDQFALVQADIEQPYEAAELAQSILDDLEAA
FALDHQEIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKTRSRNRYQFYIASVDTEMR
RRRELEKDLRDALVRGQFYLVYQPQISYRDHRVVGVEALIRWQHPEHGLVPPDLFIPLAE
QNGTIIAIGEWVLDQACKQLRDWHDQGFVDLRMAVNLSTVQLHHAELPRVVNNLLQMYRL
PPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKI
DKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETPEQEAYIISEGCHEGQGYLYS
KPLPARELSAYLKQAQRSNAAIL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctggaactcaagaacagcttgtcggtgaagttgctccgggtcgtgctcctttcg
gcattgatcgtaggcgtagtcttgagctgcgcgcagatcgttttcgatgcctacaaaacg
cgccaggccgtggccagcgatgcccaacgcatcctcgacatgttccgcgacccctcgacc
caggccgtctacagcctggaccgggaaatgggtatgcaagtgatcgaaggcctgtttcag
gacgacgctgtgcgcaaggcctccatcggccatcccaacgaagccatgctcgcgcaaaag
tctcgcgagcttcagcactccgacagtcgctggctgaccgacctgatcctcggcaaggaa
cgcaccttcaccacccaactggtgggtcgcggtccttacagcgagtattacggcgacttg
aacatcaccctcgacaccgccacctatggccagggcttcatcgtcaattcggtgatcatc
ttcatctccggcgtgttgcgtgcgatggccatggggctggtgctgtacctggtctatcac
tggctgctgaccaagccgctgtcgcggatcatcgaacacctcacggaaatcaatccggat
cgccccagcgaacacaagatcccgctgctcaaggggcatgaaaagaacgaactggggatc
tggatcaacaccgccaaccagttgctcgagtccatcgagcgcaacacccatttgcgtcac
gaagcggaaaacagcctgcttcgcatggcccagtacgacttcctcaccggtctgccgaac
cgccagcaattacagcagcaactggacaaaatcctggtagacgccggcaagttgcagcgt
cgggtcgcggtattggtggttggcctggacgacttcaagggcatcaacgaacaattcagc
taccagaccggcgaccaactgctgttggccctggccgatcggctgcgagcgcacagcgga
cgccttggcgccctcgcccgcctcggcggcgaccagttcgccctggttcaggccgacatc
gaacaaccctacgaagcggccgaactggcccaaagcattctcgatgacctggaagcggca
tttgccctcgatcatcaggagattcgcctgcgcgccaccatcggcatcaccctgttcccc
gaggacggtgacagcaccgagaaactgctgcaaaaagccgagcagaccatgaccctggcc
aagactcgctcgcgcaaccgttatcagttctatatcgccagcgtcgacaccgagatgcgc
cgccgtcgcgagctggaaaaagacctgcgcgacgccttggtccgtggccagttctacctc
gtctaccagccgcagatcagctatcgcgatcaccgggtggtgggtgtcgaggcgctgatt
cgctggcagcatcccgagcacgggctggttccgccggacttgttcatccctttggccgag
caaaacggcaccatcatcgccatcggcgaatgggtgctggatcaggcgtgcaagcaactg
cgcgactggcatgaccagggtttcgtcgacctgcgcatggcggtgaatctgtccacggtg
cagttgcaccacgccgagttgccacgggtggtcaataacctgctgcagatgtatcgcctg
ccaccgcgcagcctggagctggaagtcaccgaaaccggcctgatggaagacatcagcacg
gccgcccagcatctgctgagcttgcgccgttccggtgcgctgattgcgattgacgacttc
ggcaccggttactcgtcattgagttatctgaaaagcctgccgctggacaagatcaagatc
gacaagagcttcgttcaggacctgctcgatgacgacgacgacgcgaccatcgttcgggcc
atcatccagctgggcaagagcctgggcatgcaggtgattgccgagggagtggaaaccccc
gagcaagaggcctacatcatttccgagggttgtcacgaaggtcagggctatctctatagc
aagccgctgccggcgcgggaattgagtgcgtatctgaaacaggcccagcgcagtaacgcg
gctattttgtag
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