Pseudomonas protegens Pf-5: PFL_0387
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Entry
PFL_0387 CDS
T00249
Symbol
thiI
Name
(GenBank) thiamine biosynthesis/tRNA modification protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00730
Thiamine metabolism
pfl01100
Metabolic pathways
pfl01240
Biosynthesis of cofactors
pfl04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PFL_0387 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
PFL_0387 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfl03016
]
PFL_0387 (thiI)
Enzymes [BR:
pfl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
PFL_0387 (thiI)
Transfer RNA biogenesis [BR:
pfl03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PFL_0387 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AAY95796
UniProt:
Q4KJQ2
LinkDB
All DBs
Position
440842..442296
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AA seq
484 aa
AA seq
DB search
MKLIVKVFPEITIKSRPVRTRFIRQLAKNIRAVLRDLDPAVVVNGVWDNLELETAVSEPK
ALKDMTERLSCMPGIAHFLQVDEYPLGDFDDIVAKCKQHFGEALPGKVFAVRCKRAGKHE
FSSMDVEKYVGSQLRRQCGAAGISLKEPEIEVRMEIRDQRLFVIHSQHNGIGGYPLGALE
QTLVLMSGGFDSTVAAYQIMRRGLMGHFCFFNLGGRAHELGVMEVAHYIWKKYGSSQRVL
FVSVPFEEVLGEILGKVDNSHMGVILKRMMLRAASSIADRLHIDALVTGEAISQVSSQTL
PNLSVIDCVTEKLVLRPLIASHKQDIIDLAVEIGTADFAKHMPEYCGVISVNPKTHAKRH
RVEHEEKEFDMAVLERAIERAKLVPIDRVIDELGQDVQIEEVSEALAGQIVIDIRHPDAE
EDQPLELAGIEVKALPFYALNARFKELDPTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaatcgttaaagttttcccggaaatcaccatcaagagccgcccggttcggacg
cgtttcatccgtcagttggcgaagaacatccgtgccgtgctccgcgacctggacccggcc
gtggtggtcaatggtgtgtgggacaacctcgagctggaaaccgccgtcagcgagcccaag
gccctgaaggacatgaccgagcgcctgagctgcatgcccggcatcgcgcatttcctgcag
gtcgacgaataccctctgggcgacttcgacgacatcgtcgccaagtgcaagcagcacttt
ggcgaagccctcccggggaaggtttttgccgtgcgctgcaagcgtgccggcaagcatgaa
ttcagctccatggacgtggaaaaatacgtcggcagccaactgcgtcggcagtgcggcgcc
gccggaatttccctgaaagagcctgaaatcgaagtgcggatggaaattcgcgaccaacgg
ttgttcgtgatccacagccagcacaacggcatcggcggctaccccctgggcgccctggaa
cagaccctggtgctgatgtccggcggtttcgattccacggtggcggcctaccagatcatg
cgccgcggcctgatggggcatttctgcttcttcaacctgggcgggcgtgcccatgaactg
ggcgtgatggaagtcgcgcactatatatggaagaagtacggcagctcccagcgcgtgctg
ttcgtcagcgtgccgttcgaggaagtgctcggggaaatcctcggcaaagtcgacaacagt
catatgggcgtcattttgaagcgtatgatgttgcgtgccgcgtcgagcatcgccgaccgc
ctgcacatcgatgcgctggtgaccggcgaggcgatttcccaggtgtccagccagaccctg
ccgaacctgtcggtgatcgactgcgtgaccgagaaactggtactgcgccccctgatcgcc
agccacaagcaggacatcatcgacctggctgtggagatcggcacggccgacttcgccaag
cacatgccggagtactgcggggtcatttcggtgaaccccaagacccatgccaagcgccat
cgcgtcgagcatgaagagaaagaattcgatatggcggtgctcgagcgtgcgatcgagcgg
gccaaactggtgccgatcgatcgggtgatcgacgagttgggccaggatgtacagattgaa
gaagtcagtgaggcgctggccggtcagatcgtcatcgacatccgtcatccggatgccgag
gaagaccagccgctggagctcgcaggcatcgaagtaaaagcgctgccgttctatgcattg
aacgcccgcttcaaggaactggaccctacgcgccagtacctgctgtattgcgacaaaggc
gtcatgagtcgcctgcatgctcaccatctgctcagtgagggacatgccaatgtgcgcgtt
tatagaccgagctaa
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