KEGG   Pseudomonas protegens Pf-5: PFL_1032
Entry
PFL_1032          CDS       T00249                                 
Symbol
ribD_1
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pfl  Pseudomonas protegens Pf-5
Pathway
pfl00740  Riboflavin metabolism
pfl01100  Metabolic pathways
pfl01110  Biosynthesis of secondary metabolites
pfl01240  Biosynthesis of cofactors
pfl02024  Quorum sensing
Module
pfl_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pfl00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PFL_1032 (ribD_1)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PFL_1032 (ribD_1)
Enzymes [BR:pfl01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PFL_1032 (ribD_1)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PFL_1032 (ribD_1)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AAY90319
UniProt: Q4KHX0
LinkDB
Position
complement(1185376..1186482)
AA seq 368 aa
MTYFSEVDFQHMQHALSLAERGSHSTWPNPRVGCVIAHGSQVVGEGWHRRAGGPHAEVFA
LRQAGGLARGATAYVTMEPCSHVGRTGACHQALIDSGVHSVVVAHQDPFEQVNGQGIAQL
RNAGIEVRVGLLESAAQELNRGFLSTVRRQRPWVQLKMGMSLDGRTALDNGRSKWITSTR
ARADVQYWRARSSAILTGSGTVLADDPLLTVRQLSSPEALAPVRVVLDSQGRVPATARVF
NDQAPSLHVVHRECPLASSDSEQVMALPGDDQGLHLEQLLHNLSQRGLHDLLVEAGPTLA
GNLLKAHLVDELLLYVAPRLLGDLARPLVHLPCFDRLEEALDFALYDVSQLGPDLRLRLR
PAQPPSAL
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgacctacttcagcgaagtcgacttccagcacatgcagcacgccctgtccctggcagaa
cggggcagccactccacctggcccaatccgcgggtgggttgcgtgatcgcccatggctcg
caagtggtcggcgaaggctggcatcggcgggccggcgggccccacgccgaggtgttcgcc
ctgcgccaggccggtggcctggcgcggggtgccaccgcctacgtgaccatggaaccctgc
agccatgtcggacgcaccggtgcctgccatcaggccctgatcgacagcggcgtgcacagc
gtggtggtggcccatcaggacccgttcgaacaggtcaacggccagggcatcgcccaactg
cgcaacgccggaatcgaggtgcgggtcggcctgctggaatcggcggcccaggagttgaac
cgcggctttctgtccacggtgcggcgccagcggccctgggtgcaactgaaaatgggcatg
agcctggacgggcgcacggccctggacaatgggcgctcgaagtggatcaccagcacccgg
gcccgggccgacgtgcagtattggcgggcccgcagctcggcgatcctcaccggcagcggt
accgtcctggcggacgacccactgctcacggtacgccagctgtcctccccggaggccctg
gcgccagtacgtgtggtgctcgacagccagggccgggtgcccgccacggcgcgggtgttc
aacgaccaggcgccgagcctgcacgtggtgcaccgggagtgcccgctggccagcagcgac
agcgagcaggtcatggcgctgcccggggacgaccagggcctgcaccttgagcagttgctg
cacaacctcagccagcgcggcctgcacgacctgctggtggaagccggcccgacactggcc
ggcaacctgctcaaggcgcatctggtggatgagttgctgttgtacgtggctccgcgcctg
ctgggggatctggcccggccgctggtgcacctgccgtgcttcgaccgcctggaggaggcc
ctggactttgccctgtatgacgtcagccagctggggccggacctgcgtctgcgcctgcgg
ccggctcagccgccgagcgcgctatga

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