Pseudomonas protegens Pf-5: PFL_4199
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Entry
PFL_4199 CDS
T00249
Symbol
atuF
Name
(GenBank) geranyl-CoA carboxylase, alpha subunit AtuF
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00907
Pinene, camphor and geraniol degradation
pfl01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PFL_4199 (atuF)
Enzymes [BR:
pfl01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
PFL_4199 (atuF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_3
HlyD_D23
ATP-grasp_3
GCV_H
UPF0150
Motif
Other DBs
NCBI-ProteinID:
AAY93455
UniProt:
Q4K8Z2
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All DBs
Position
4885307..4887262
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AA seq
651 aa
AA seq
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MPNFNKILIANRGEIACRIQRTAQALGYRTVAVFSDADAEALHVQLADEAVHIGPSAVQQ
SYLDGAALLEAARRTGADAIHPGYGFLSENAEFAAACESAGLVFIGPSAAAIELMGSKRR
SKIAMLEAGVPCIQGYQGAEQDDATLQREAQRIGYPLMIKASAGGGGRGMRLVHQAGQLL
EQIRTARSEALHAFGSDELILEQALIEPRHVEVQLFGDEHGQLIYLGERDCSIQRRHQKV
IEEAPCPVMTPELRQAMGEAALKAGRAVNYVGAGTVEFLLDASGQFYFLEMNTRLQVEHP
VTELVTGLDLVALQLQVAAGEPLPLGQEQVRLDGHAIEVRLYAEDPAQNFLPQTGQILRW
EPAPGIRTDHGLQEGQWVSPFYDPMLGKLIAHGATREEARRKLLRGVEDCVLLGLESNRR
LLANLLRHPVFASGHFSTAFIAEHFAQDPSLQPQEPTAEELAIAAALFHHHSASAHGPAL
NAWSNNAGVPLDYRLGVQDRQWSLHLNALPSGAVQVRQGDGLLELKVRSADGRRASLEIN
GIRRPCAYRLEGGELWLSNAKGSLHLVDRTHAPAQGQNTASSGTLKAPMDGAIVDVLVSE
GMHVSKGQLLLVLEAMKMEHPLKAGIEGVITRVQVNLGDQVKNRQVLVEVE
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatttcaacaagatcctgatcgccaaccgtggcgaaatcgcctgccgcatccag
cgtaccgcccaggccctgggctatcgcaccgtggccgtgttcagcgatgccgatgccgag
gccttgcatgtgcaactggctgacgaagcggtgcatatcggcccgtccgcggtacagcag
tcctacctcgacggcgccgcgctgctggaagcggcacggcgcaccggtgccgacgccatt
cacccgggctacggctttctttcggaaaatgccgagttcgccgccgcctgtgaaagcgcc
ggcctggtgttcatcggccccagcgctgccgccatcgagctgatgggcagcaagcgtcgc
tcgaagatcgccatgctcgaagccggcgtgccgtgcatccagggctatcagggggcggaa
caggacgacgccaccttgcagcgcgaagcccagcgcatcggctatccgctgatgatcaag
gccagcgccggcggtggcgggcgtggcatgcgcctggtacaccaggccggccagttgctg
gaacagatccgcacggcccgctccgaagccctgcacgccttcggcagcgacgaactgatc
ctggagcaggcgctgatcgagccccggcacgtggaggtgcagctgttcggcgacgagcat
ggccagttgatctacctgggtgagcgggattgctcgatccagcgccgccatcagaaggtc
atcgaagaggcgccctgcccggtcatgaccccggagctgcgccaggccatgggcgaggca
gcgctcaaggccgggcgggcggtgaactatgtgggcgccggtaccgtggaattcctcctg
gatgcgagcgggcagttctatttcctggaaatgaatacccggctgcaggtggagcacccg
gtcaccgaactggtaacgggcctggacctggtggccctgcaactgcaagtggcggccggc
gagccgctgcccctgggccaggagcaggtgcgcctcgacggccacgccattgaagtgcgg
ctgtatgccgaggacccggcacagaacttcctgccgcagaccggccagatcctgcgctgg
gagccggcaccggggatccgcaccgaccatggcttgcaggaaggtcaatgggtcagcccg
ttctacgacccgatgctgggcaagctgatcgcccacggtgctacccgcgaagaggcgcgg
cgcaagctgctgcgtggcgtcgaggattgcgtgctgctggggctggaaagcaaccgccgg
ctgctggccaacctgctgcgccacccggtgttcgccagcggccacttcagcaccgccttc
attgccgagcattttgcccaggacccgagcctgcaaccccaggagcccactgccgaggaa
ctggccatcgccgctgcgctgttccaccaccacagcgccagcgcccatggcccggcgctc
aatgcctggagcaacaacgccggggtgcccctggactaccggctcggggtgcaggaccga
caatggtcgctgcacctgaacgcactgccctcgggcgccgtgcaggtgcgccagggcgat
gggctgctggagctcaaggtgcgcagcgccgatggccggcgggccagcctggagatcaac
ggcattcgccgcccgtgcgcctatcggctggagggcggggagctgtggctgagcaacgcc
aagggcagcctgcacctggtggatcgtacccatgccccggcccagggccagaacactgcc
tccagcggtacgctcaaggcgcccatggacggggcgatcgtcgatgtactggtcagtgag
ggcatgcacgtaagcaagggccaattgctgctggtgctggaggcgatgaagatggagcac
ccgctcaaggccgggatcgagggggtgatcacccgggtccaggtcaacctcggggaccag
gtgaaaaaccgccaggtactggtggaggtggagtag
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