Perca flavescens (yellow perch): 114549035
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Entry
114549035 CDS
T07494
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114549035 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pflv03032
]
114549035 (pola1)
Enzymes [BR:
pflv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
114549035 (pola1)
DNA replication proteins [BR:
pflv03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
114549035 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
114549035
NCBI-ProteinID:
XP_028424944
LinkDB
All DBs
Position
22:complement(12806505..12872662)
Genome browser
AA seq
1481 aa
AA seq
DB search
MAPVSNPEKDMDGPDGDDGGDACGLAKSRSRREKREKVGRKSALEQLKKAKLGEKIKYEV
EEFTSVYEEVDEQQYSKMVRERQEDDWIIDDDGTGYVEDGREIFDDDLDDDVVENKKGKA
GAKGAGSKTNVKKSAVAKPNTIKSLFMNSNVKRPAEKDVDLSKDDLLGDILQDLHSEKPT
LLTPPPVVTLKKKKSLGSPMNPFSLKPQMPKQESASATGLKAKVIRPPPSDLTPRSSACL
PSATTPAPPVKKQGAKVEELEPEQENDPLAFDGVDFDEPMEVGLEEEKPALEDDAESSPK
AAAAAAAVAVKVEPKAELQDPVLLTNRIGSSWGQEEEGGASETPAEIQVDSSQLPLVEGA
DGEQVFRFYWLDAFEDPYSQPGVVYMFGKVWIESAKSYVSCCVTVRNIERTMYFLPREYK
VNTKTGEVLDTPVGMMDVYQEFNELSEKFRIMKFKSKKVEKSYAFEIPDVPTQSEYLEVR
YSAEFPALPSDLKGATFSHIFGTNTSSLEHFLLSRKIKGPCWLDIKTPQLISQPVSWCKV
EALALRTDLVTVVKDLSPPPITVMSISLKTIQNPKTHHNEIVSLSALVHYQFHMDKAPPQ
PPYQTHFTVVSKPADCIFPYDFKDAVRKKNGKVEIAATERTLLGFFLAKMHKIDPDVLVG
HDIFGFDLEVILQRITVCKVPHWSKIGRLRRANMPKLGGRGSFAEKSATCGRLVCDVEIS
AKELIRCKSYHLTELAAQVLKMERVTVPQENIKNLYSDSPHLLYLLELTWTDTKLILQIM
CELNVLPLALQITNIAGNIMSRTLMGGRAERNEFLLLHAFHDKNYIVPDKPSFKKAQQEM
VEGEEDVDAGKGKRKKKAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTV
QREAHNTQNKNQEDGSEDIPEIPDTNLEMGILPKEIRKLVERRKQVKQLMKQQDINPDLY
LQYDIRQKALKLTANSMYGCLGFSFSRFYAKPLAALVTHKGREILMHTKDMVQKMNLEVI
YGDTDSIMINTNSKSLEEVFKLGNKVKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALV
VENHGEGRYSVKQELKGLDIVRRDWCDLAKECGNYVIGQILSDQSRDVIVENIQKHLVEL
GEKVAAGTVPLNQYEIHKALTKDPQDYPDKKSLPHVHVALWINSQGGRRVKAGDTVSYII
CKDGSTLAASQRAYALEQLQKQEGLSLDTQYYLAQQVHPVVSRICDPIEGIDIVLIATWL
GLDPSQFRAHQQYQREEEADGMLGAPVQLTDEERYKDCERFTFTCPQCGTDNIYDSVFEG
AGLKLEPSLLRCCHIPCGSSPIADAVNISNKLLLDIRRHIKKYYSGWLVCEDQACQNRTR
RLPIAFSRHGPICPACTRATLRPEYSEKALYNQLCFYRFIFDWDHAAAKVLQCDERGRAK
LWKTEKEVYRRLKEVPDKALATSSYSEINLAKLFQAFSSLK
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atggctccggtatcaaacccagagaaagacatggacggtccggatggcgacgatggaggc
gatgcctgtggtctggcaaagtctcgctccagacgggagaagagagagaaggtagggagg
aagtctgcactggagcagctcaagaaagccaagttgggggaaaagatcaaatatgaggtg
gaggagtttacaagtgtgtatgaggaggtggacgagcagcagtactcgaagatggtacga
gaaagacaagaggatgactggattattgatgatgatggaacaggatacgtggaggatgga
agagaaatctttgacgatgacttggatgatgatgtagttgaaaacaaaaaaggaaaagct
ggtgctaaaggagcaggctcaaagacaaacgtaaagaaatctgccgtagccaagcccaac
accattaagagcctcttcatgaacagtaatgtcaagaggcctgctgagaaagacgtagac
ctgtccaaagatgacctattgggagatatcctacaggacctgcactctgagaaaccgact
cttctgactcctccgccagtggtcactctgaagaaaaagaagtctcttggatcacccatg
aatcccttttcactcaaacctcaaatgccaaagcaggagtcagcctcagctacagggtta
aaggccaaagttatcaggccaccgccttctgacctgacacccaggtcatcagcctgcctc
ccttccgccaccacacctgctcctcctgtgaagaagcagggggcaaaagtggaggagttg
gaaccagagcaagagaatgaccctctggcttttgatggggtggactttgatgagccgatg
gaggttgggcttgaggaggagaagcctgcacttgaagatgatgctgagtcttcacccaaa
gcagcagcagcagcagcagcagtggcagttaaagtggagcccaaagcagagcttcaggac
cctgttttattgaccaacaggattggaagctcttggggacaagaggaggaaggtggagca
agtgagacaccagcagagatacaggttgactccagccaactcccgttggtggagggcgca
gacggggagcaggtctttcgcttctattggttggatgcctttgaagacccctacagccaa
ccaggtgtggtgtacatgtttggaaaagtgtggattgagtctgcaaagtcttatgtcagc
tgctgtgtcactgtcaggaacattgagcggaccatgtacttcctgcctcgcgaatataaa
gtgaacaccaagaccggcgaggtgttggacactcctgtaggaatgatggatgtctaccag
gagtttaatgaactctctgagaagttcaggatcatgaagttcaagtccaagaaagtggag
aagagctacgcctttgaaattcctgatgtgcccactcagagcgagtacttggaagtcaga
tattctgctgagttccctgcgctgccttcggaccttaagggggcgaccttttcccacatt
tttggaaccaacacttctagtctggagcacttcctcctcagcaggaagattaaagggcct
tgttggctggacatcaagacaccacagctgatcagccagccggtcagctggtgtaaggtg
gaggctctggccctgaggaccgacctggtcactgtggtcaaagacctgtcgcctccaccc
atcaccgtcatgtccatcagcctcaagactatccagaaccccaagacacaccacaacgag
attgtgtccctgtctgcattggtccactatcagttccatatggataaagctccacctcaa
cctccataccagacccattttactgtggtcagtaaaccggctgactgtatcttcccctac
gacttcaaagatgctgtgaggaagaagaatgggaaagtggagatagctgctacagagcgg
actctgcttggcttcttcctggccaagatgcacaaaatcgaccctgatgtgctggtgggt
cacgacatctttggttttgacctggaagtgattctgcagagaatcactgtgtgcaaggtt
ccccactggtctaagattggacgcctcaggagggccaatatgcccaaactagggggtcgt
ggttcctttgcagagaagagcgcgacctgtggccgtctggtgtgcgacgtggagatctca
gccaaggagctgattcgctgtaaaagttaccatctgactgaactggctgcacaggtgctg
aagatggagagagtcacagtccctcaggaaaacatcaagaatctctacagtgactctcct
cacctgctctacctgttggagttgacatggacagacaccaagctgatcctccagatcatg
tgtgaactcaacgtgctgccgctggccctgcagatcaccaacattgccggcaacatcatg
tctcgtactctaatgggcggccgcgcagaaaggaacgagttcctgttgcttcatgccttc
cacgacaaaaactacattgtccctgacaagccctccttcaaaaaggcccagcaggaaatg
gtagagggagaagaagatgtggatgcagggaagggcaagcggaagaagaaggcagcctat
gctggagggctggtgctggatcctaaagttggtttctacgacaagtttgtgctgctgctt
gacttcaacagcctctatccctcaatcatccaagagttcaacatctgcttcaccactgta
cagagggaggctcacaacacacagaataagaatcaggaggatgggtcagaagacattcct
gaaattccagatacaaacctggagatgggaatcctgcccaaagaaatcaggaagctggtc
gagcggcgtaaacaggtcaagcagctgatgaaacagcaagacatcaacccagacctctac
ctgcagtatgacattcgccagaaagctctgaagctgacagcgaacagtatgtacggctgc
ctgggattcagcttcagccgcttctacgccaagccacttgccgccctggtcacacacaag
ggtagagagattctgatgcacaccaaagacatggttcagaagatgaatctggaagtcatc
tacggagacactgactccattatgatcaacaccaacagcaagtctctggaggaagtcttc
aaacttggcaacaaggtgaaggccgaagtaaacaagctctacaaactgctggagatcgac
atcgacggtgtgtttaagtcgcttttactgctgaagaagaagaaatacgctgccttggtg
gtggagaaccatggcgaaggacgatacagtgtcaagcaggagctcaaaggcttggacatt
gtgcgcagagattggtgtgacctggccaaggaatgtggcaactatgtgattggtcaaatc
ttgtctgaccagagtcgtgatgtcattgtggagaacatccagaaacacctggtggagttg
ggagagaaagtagcagctggaaccgtaccactcaaccagtatgagatacacaaggctttg
actaaagatcctcaggactatccagataagaagagcctccctcatgtccatgtggctcta
tggatcaactcccagggtggtcgcagggtcaaagctggagatacagtctcctacatcatc
tgcaaggacggttccacgctggcagccagtcagagagcctatgctctagagcagctccag
aagcaggagggtctcagcctggacactcagtactaccttgcccagcaggtccaccctgtg
gtgtcccgcatctgtgaccccatcgagggcatcgacatcgtgctcatcgccacgtggctg
ggtctggacccaagtcagttccgggctcaccagcagtaccagagggaggaagaggctgat
ggcatgctgggagctccggtccagctgactgatgaggagcgctacaaagactgcgagagg
ttcaccttcacctgccctcaatgtggcactgacaacatctacgacagcgtctttgaagga
gctggattaaagttggagcccagcttgttgcgatgctgtcacatcccctgtgggagcagc
cccattgcagacgctgtcaacatcagcaacaaactgctacttgacattcgtcgccatata
aaaaaatactactctggctggttggtatgcgaggaccaggcatgccagaacagaaccaga
cgtttgcccatcgccttctcccgccacggacccatctgccctgcctgcaccagggcaact
ctcagaccagagtactccgagaaggccctgtacaaccagctctgcttctacaggttcatc
tttgactgggaccatgcagctgccaaagtactacagtgtgatgagagaggtcgcgcaaag
ctctggaaaaccgaaaaagaggtgtatcggaggctgaaggaagtgccagataaagccttg
gccaccagtagctactcagagattaacctggccaaactcttccaggccttctcctccctc
aagtaa
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integrated database retrieval system
