Perca flavescens (yellow perch): 114569719
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Entry
114569719 CDS
T07494
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pflv01001
]
114569719 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pflv04054
]
114569719 (ciita)
Enzymes [BR:
pflv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
114569719 (ciita)
Protein kinases [BR:
pflv01001
]
Serine/threonine kinases: Other
TAF1 family
114569719 (ciita)
Pattern recognition receptors [BR:
pflv04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
114569719 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
nSTAND3
LRR_8
AAA_16
AAA_22
TsaE
SRP54
AAA
Motif
Other DBs
NCBI-GeneID:
114569719
NCBI-ProteinID:
XP_028455558
LinkDB
All DBs
Position
15:complement(6764434..6786117)
Genome browser
AA seq
1443 aa
AA seq
DB search
MLLPLVPGMTACCATSKNKVTDGEAQCPVLNMEEETELAIACRTLDLYADNFKCTEAIAD
PSFTLDTGAQKGLCLSTCDSVPTTGLDADHLNVSGAGRNGLPVQACVATDTNNNITDGLD
VCWAADRTTEDLLCLMAGVQCGTRAGFTEDLAHFFSPCTPTDTHAHAQDHSFHSGTDHSM
TLNNVEKKISSAAYSTNTCSTDGKTDFYEYKEDEERMDSHWGAKMQHVDQDPFISPDLGV
LPDDLSEYLNNDEDNFFWDDFFDSSLLNCEEIITCTDLPMATELLCPDSQQQGEKNEITG
ETNNRRKRPRAPRSQRCTDENTPSRPKRQRAAGRSKTKVAEPTVTQSTDTGSERSLAEPV
GLSPTQQILHLHPSIQFITIPDSPGYQVVQTLRLSPPVIGLPLPNTPATPRFILVPAASP
PFQRQVPPLSPIGGAVAPVQMSSSPPGSLSDTASKAMSHPCASPLSPSNEMSTCKESPVP
PSPTDLDIPLIVKDYIQEAKAHMRQTCQDMGSDLSLTSHYVNVRLSQREILRSGKNTNKD
LDKELVIMGDTDRQNSVLGQSHIFKGSNGDKPRRYIMLLGNAGMGKTTLIRKLCLDWSRD
CIPQFDFVFSLDGKALSLTEPNNSLQTLLLNLSSFAPTCMDPDAVYAQILAAPKRVLIVF
DGFGELRDYEILLQTLEKDLISSLQKDSKAQTYTVKQLYSAILQRVLLPGCTLLLSTRPR
GTASQLLRRTDSLLEICGFTPADIEIYLSQYFTDPGLRASALDRLKNCSYLHLLCWNPGL
CRLVCLVLEQCKGLEVLPRTLTGLCHQALRLKMEKDSRSAHSQAEAQSEISVQSAEKPQT
QISSSSQVTRGNKNAPTKSRAQARTRSQRARGSKRHEKEEDDIDGEGMRSVVGEVDRTEE
RELLSQLSSLAWDGVKANSSILPTGRTVSAKLKAFGHRTGLFFSYHLRTRQVVSSGEREG
GGREDREEMGTGEDGEKRGNKGKTDTENADASDDHILLWANPFLQSYLAGLHLSLSRTVT
DRAFLQTLPFQSGQKGRRRPQREELELTQRFAVGLLFHNRTELQRLHSYTETAFRDMVAA
KQALVTNHLEVLSHGELNPAQVLEACHYVYEASSTHGDGSRNSGSTRLVAHLAANLPEVL
TFRGVPLKPSDVFPVQNVLERGGTKGKRFCLDLEDSGIQISGLRSLVGLNNINTYRACIA
DVITLWEQLEQSDEEGLLQGMVSKFKIHPLKATQACHIEHLAKLVNIHTHKKLSDSSSQS
DSILAEGVPAVKELHKLELELGPEKGPLVLPKLWELLPGLHNLQHLDLENSKIGDEGAEK
LTDALVSLGSLEILNLSQNCIGDKGVTKLATTLRALPKLHCLSLYSNVISDEGAESLADV
LPHMASLTNLDVKYNKLTDVGAQSLGASLKNCKKMKTLRMWNQCIPYGVFERLQQQDNRI
LLQ
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgcccctagttcctggtatgactgcttgctgtgcaacaagtaaaaacaaagtg
acagacggtgaagcacaatgccctgttttaaatatggaagaggaaacagagcttgcaatt
gcttgcaggacattagatttgtacgccgacaactttaagtgtacagaggcgattgcagac
ccgagcttcacgctggatacaggagcacaaaaaggcctctgtctatctacatgcgacagc
gtgccgacaactggattggacgcggatcatttgaatgtttctggagcaggaagaaatggc
ttacctgttcaagcctgcgtagctacagacacaaacaacaacatcacagacgggctggat
gtctgctgggcagctgacaggacaacagaggacctgctctgtttgatggcaggtgtacaa
tgtggcacacgtgcaggatttacagaagaccttgcacattttttttctccctgcacacca
acagacactcatgctcacgcacaagatcactcgtttcactccggtacagatcacagcatg
acattaaacaacgtagaaaaaaaaatatccagtgctgcttatagtacaaacacgtgcagc
actgatggcaaaacagacttttatgagtataaagaagatgaggagaggatggattcacac
tggggtgccaagatgcagcacgtggatcaggacccatttatctctcctgacttgggagtt
ctaccagatgatttatctgaatacttgaataatgatgaagataactttttttgggatgac
ttctttgacagttcattgctgaattgtgaggaaatcatcacctgcactgatcttcccatg
gcaacagagctgctctgcccagacagccagcagcagggagagaagaacgaaataacagga
gaaacaaataacaggagaaaaagacccagagctccccgatcacaacggtgcactgatgag
aacacaccatctaggccaaaaaggcaaagagcagcaggacgatcaaaaaccaaagtggct
gagccaactgtcactcaaagcactgacacaggatcagagaggagtttagcagagccggtg
ggcctctcccccactcagcaaatccttcatctccatccctccattcagtttatcaccatc
ccagactctccagggtatcaggtggttcagacactgaggctctctcctccagttattgga
cttccactccccaacacacctgctacacctaggttcatattagttcctgctgcctcacca
cccttccaacgccaagtgccaccactctccccaattggtggtgcagtagcgccagtccaa
atgagttcatccccaccaggatctctgtcagacaccgctagcaaagccatgtctcaccct
tgtgcctcacccctctcccccagcaatgaaatgtctacatgtaaggaatcccctgttcct
ccatctcccactgaccttgatattccactgattgtaaaggactacattcaggaagccaaa
gcacacatgagacaaacctgccaggatatggggtcagaccttagcctgacttctcactat
gtgaacgtgcgactgagccagagagagattcttcgctctggaaaaaacacaaacaaagac
ctggacaaggagctggtcatcatgggagatacagatcgtcaaaacagcgtgttggggcag
agtcatatctttaaaggctcaaatggcgacaaacccagacgctacataatgctacttggc
aacgctggcatgggaaaaaccaccctcatcaggaaactgtgtctcgactggtccagagac
tgcatcccacagtttgacttcgtcttctctttagacggcaaagcactctctttaacagag
ccgaacaacagccttcagaccctcctattaaacctttcctccttcgcccctacctgcatg
gaccccgacgcagtgtacgctcaaatccttgcagcccctaagcgtgtgctcatcgttttt
gatggctttggcgagttacgggactatgaaattcttctccagactctagaaaaagacttg
atatcttcattgcagaaagacagtaaagcacagacctacacagtaaaacagttatactct
gccatccttcagagggtcctcctcccaggctgcactcttctgctctccacacgaccaaga
ggcactgccagccagctactccggcggacggacagccttttggagatttgcggcttcacc
cccgcggacatagagatatatttgtcccagtacttcactgaccctggcctcagagcatct
gctttggaccgcttgaaaaactgcagctatctacatctcctctgctggaaccctggactg
tgtcggttggtctgcttggttttggaacagtgcaaaggtttagaggtcctgccgagaact
ttaacagggctctgccatcaagcgcttcgtctgaaaatggaaaaggacagtaggagcgca
cactcgcaggctgaagctcaatcagaaatatctgtgcaatcggcagaaaaaccccagaca
caaatctcaagtagttctcaagttacgaggggtaacaaaaacgccccgacgaagtcccga
gcacaggctcgcactcgcagccaaagagcgagggggtcaaaaagacatgagaaagaggaa
gatgacattgatggagaagggatgcggagtgttgtgggggaagtagatagaacagaggag
agagagttgctgtcccagctgagttctttggcctgggatggggtcaaagcaaactcctcc
atcctccccacgggacggactgtatctgccaaacttaaggcgttcggccacaggacaggg
ctcttcttctcttaccatctgaggacgaggcaggttgtctcaagtggcgagagagaggga
ggaggaagggaggacagagaagaaatgggaacaggagaggatggagaaaagaggggaaac
aagggaaagacggacactgaaaacgctgatgccagtgatgaccacatcctgttgtgggcc
aacccttttcttcagagttacctggcagggctccatttgtctctgtcaaggactgtaaca
gaccgtgctttcctccagaccctccctttccagtcaggccagaagggacgtcgtcgacca
caaagggaagagctcgaactcactcagcgatttgccgtcgggcttctgttccacaacagg
acagagctgcagaggcttcactcatacacagagacagccttcagagatatggtggctgcc
aagcaagctttagtaacaaaccaccttgaggttctttcccatggtgagctgaaccccgcc
caggtcctggaggcatgccactatgtttatgaggcgagttccacacatggtgacggtagc
agaaacagtggcagcacacgattagtcgctcacctggcagcaaatctcccagaagtcctg
acatttcgtggagttccactcaagccgtcggacgtgttccctgtgcagaacgttctcgaa
aggggtggaactaaaggtaaacggttctgtttggatctggaggattctgggatacagatt
tcgggactcagatctctggtggggctcaacaacatcaacacatacagggcatgcattgct
gatgtcatcaccttatgggagcagttagagcagagtgacgaagaagggctcctacaaggg
atggtgtccaaattcaagatccaccctctgaaggccacacaagcgtgtcacatagagcac
ttggcaaagctggtgaacatacacacgcacaaaaagctgtcggacagttcaagccaatca
gattccatcctggccgagggagtaccagctgtcaaagagctacacaagctggagcttgaa
cttggtccagagaaaggtcccctggttcttcccaagctgtgggagctcctgccaggtcta
cataacctgcagcacttagatctagagaacagtaagataggggacgaaggggcagagaaa
ttgactgatgctttagtctcacttggttccctggagatactcaatctgtcacagaattgt
ataggagacaagggggtgacaaaactggcaaccacattgagggccctgcccaaactacac
tgtttaagtctctacagtaacgtgatatctgatgaaggggcggagagtttagcagatgtc
ctgccacacatggcttcgctcactaacttggatgtgaagtacaacaagctaacagatgtt
ggagctcagagcctgggagccagtctgaaaaactgtaagaaaatgaagaccttgaggatg
tggaaccagtgtattccatacggagtgtttgagagacttcagcagcaggacaaccggatc
cttttgcagtag
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integrated database retrieval system
