Pseudomonas fluorescens Pf0-1: Pfl01_4487
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Entry
Pfl01_4487 CDS
T00283
Name
(GenBank) diguanylate cyclase/phosphodiesterase
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Pathway
pfo02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
Pfl01_4487
Enzymes [BR:
pfo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
Pfl01_4487
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
dnstrm_HI1420
FtsL
Motif
Other DBs
NCBI-ProteinID:
ABA76224
UniProt:
Q3K7N0
LinkDB
All DBs
Position
5058259..5060310
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AA seq
683 aa
AA seq
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MKLELKNSLSVKLLRVVLLSALIVGVVLSCAQIVFDAYKTRQAVAGDAERILDMFRDPST
QAVYSLDREMGMQVIEGLFQDDAVRQASIGHPNEAMLAQKSRELQHSNSRWLTDLILGQE
RTFTTQLVGRGPYSEYYGDLSITLDTATYGQGFIVSSVIIFISGVLRALAMGLVLYLVYH
WLLTKPLSRIIEHLTEINPDRPSEHKIPQLKGHEKNELGIWINTANQLLESIERNTHLRH
EAENSLLRMAQYDFLTGLPNRQQLQQQLDKILVDAGKLQRRVAVLCVGLDDFKGINEQFS
YQTGDQLLLALADRLRAHSGRLGALARLGGDQFALVQADIEQPYEAAELAQSILDDLEAP
FALDHQEIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKTRSRNRYQFYIASVDSEMR
RRRELEKDLRDALLRDQFYLVYQPQISYRDHRVVGVEALIRWQHPEHGLVPPDLFIPLAE
QNGTIIAIGEWVLDQACKQLRDWHDQGFVDLRMAVNLSTVQLHHAELPRVVNNLLQMYRL
PPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKI
DKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQETYIISEGCHEGQGYHYS
KPLPARELSIYLKQAQRSNAAIL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctggaactcaagaacagcttgtcggtgaagttgctccgggtcgtgctcctgtcg
gcattgatcgtcggcgtggtcttgagctgcgcgcagatcgttttcgatgcctataaaaca
cgccaggccgtcgccggcgatgccgaacgcatcctcgacatgttccgcgatccctccacc
caggcggtctacagcctggaccgggagatgggcatgcaggtgatcgaaggcctgttccag
gacgacgccgtgcgccaggcctccatcggccatcccaacgaagcgatgctcgcgcagaaa
tcccgtgagctgcagcattccaacagccgctggctgaccgacctgatcctcggccaggaa
cgcaccttcaccacccaactggtgggacgcggcccctacagcgaatattacggcgacctg
agcatcaccctcgacacggccacctacggtcagggcttcatcgtcagttcggtgatcatc
ttcatttccggcgtgttgcgcgccctggccatgggcctggtgctgtacctggtctatcac
tggctgctgaccaaaccgctgtcgcggatcatcgaacacctcaccgagatcaacccggac
cgccccagcgaacacaagatcccgcagctcaagggtcacgaaaaaaacgaactagggatc
tggatcaacaccgccaaccagctactcgaatccatcgaacgcaatacccacctgcgccac
gaagcggaaaacagcctgctgcgcatggcccagtacgatttcctcaccggcctgccgaac
cgccagcaattacagcagcaactggacaagatcctggtggatgccggaaagctgcaacgc
agggtcgccgtgctttgcgtaggtctcgacgatttcaaaggcatcaacgaacaattcagc
taccagaccggtgaccagttgctgctggccctggctgaccggctacgcgcccacagcggt
cgcctcggcgccctcgcccgtctcggcggcgaccagtttgcgctggtgcaggccgatatc
gaacagccttacgaagcggcggaactggcgcaaagcattctcgatgacctcgaagcgccg
ttcgccctcgatcatcaggaaatccgcctgcgcgcgaccatcggcatcaccctgttcccg
gaagatggcgacagcaccgagaagctgctgcagaaagccgaacagaccatgaccctggcc
aagacccgatcgcgcaaccgctatcagttctatatcgccagcgtcgacagcgagatgcgc
cgccgtcgcgagctggaaaaagacctgcgcgatgccttgctgcgcgatcagttctacctc
gtctatcagccgcagatcagctaccgcgatcatcgcgtggtcggggtcgaggccctgatc
cgctggcagcatccggaacacggtctggtgccgccggacctgttcatcccgctggcggaa
cagaacggcaccatcatcgccatcggcgaatgggtgctggatcaggcctgcaagcaactg
cgcgactggcacgatcagggcttcgtcgatttgcgcatggcggtcaacctgtccaccgtg
caactgcaccacgccgagctgccccgcgtggtcaacaacctgttgcagatgtaccgcctg
ccaccgcgcagcctggagctggaagtcaccgaaaccggcctgatggaagacatcagcacc
gccgcccagcacctgctgagcctgcgccgctccggcgccctgatcgccatcgacgacttc
ggcaccggctattcgtcgctgagttatctcaagagtctgccgctggacaagatcaagatc
gacaagagcttcgtccaggacctgctggatgacgacgatgacgcgaccatcgttcgcgcc
atcattcaactgggcaagagcctgggcatgcaggtgatcgccgagggcgtggaaaccgcc
gaacaggaaacctacatcatctccgaaggctgccacgaaggtcagggctaccactacagc
aaaccgctgccggcacgcgagttgagcatttacctcaagcaggcccagcgcagcaacgcg
gccattctctga
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