Pseudomonas fluorescens Pf0-1: Pfl01_5207
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Entry
Pfl01_5207 CDS
T00283
Symbol
soxB
Name
(GenBank) sarcosine oxidase beta subunit
KO
K00303
sarcosine oxidase, subunit beta [EC:
1.5.3.24
1.5.3.1
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Pathway
pfo00260
Glycine, serine and threonine metabolism
pfo01100
Metabolic pathways
Module
pfo_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Pfl01_5207 (soxB)
Enzymes [BR:
pfo01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
Pfl01_5207 (soxB)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
Pfl01_5207 (soxB)
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Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
FAD_binding_2
Thi4
FAD_oxidored
Pyr_redox_2
Pyr_redox_3
NAD_binding_9
FAD_binding_3
Trp_halogenase
MCRA
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
ABA76944
UniProt:
Q3K5L0
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All DBs
Position
complement(5855693..5856943)
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AA seq
416 aa
AA seq
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MQRYSGFGLFKHSLSHHENWQRMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKEHGITNV
AVVEKGWLGGGNTARNTTIVRSNYLWDESAHLYEHAMKLWEGLSQDLNYNVMFSQRGVYN
LCHTLQDIRDSERRVSANRLNGVDGELLNAKQVADEIPYLDCSKNTRYPVMGATVQRRGG
VARHDAVAWGFARAADALGVDLIQQTEVIGFRKENGVCIGVETNKGFIGAKRVGVVTAGN
SGHMAKLAGFRLPIESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDG
YNGYGQRGSYPVIEHTIQAIVEMFPVLSRVRMNRQWGGIVDTTPDACPIISKTPVPNMFF
NCGWGTGGFKATPGSGNVFAASLAKGEMHPLAAPFSIDRFHNGALIDEHGAAAVAH
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgctattcgggcttcggcctcttcaaacactccctcagccaccacgaaaactgg
cagcgcatgtggcgcacgccgaccccgaaaaaggtctacgacgtggtcatcgtcggcggc
ggcgggcacggtctggcgacggcttactatctggccaaagagcacggcatcaccaacgtg
gccgtggtcgagaagggctggctgggcggcggtaacaccgcgcgcaacaccaccatcgtt
cgctccaactacctgtgggacgagtcggcgcacctgtacgaacacgcgatgaaactgtgg
gaaggcctgtcgcaggacctgaactacaacgtgatgttctcccagcgtggcgtctacaac
ctgtgccacaccctgcaggacatccgtgattccgagcgtcgggtcagcgccaaccgcctc
aacggcgtcgacggcgaactgctcaacgccaagcaggtcgcggacgaaattccgtacctc
gactgctcgaaaaacacccgctacccggtgatgggcgcgaccgttcagcgtcgcggcggc
gtggcccgtcacgatgccgtggcgtggggctttgcccgtgccgcagacgccctcggtgtg
gacctgatccagcagaccgaagtgatcggtttccgcaaggaaaacggtgtgtgcatcggc
gttgaaaccaacaagggcttcatcggcgccaagcgcgtcggcgtggtcaccgccggtaac
tccgggcacatggccaagctcgccggtttccgtctgccgatcgaatcccacccgctgcaa
gcgctggtgtccgagccgatcaaaccgatcatcgacagcgtgatcatgtccaacgccgtg
cacggttacatcagccagtccgacaagggcgacctggtgatcggcgccggtatcgacggc
tacaacggctacggccagcgcggttcgtacccggtgatcgagcacaccatccaggccatc
gtcgagatgttcccggtgctgtcgcgagtgcgcatgaaccgtcagtggggcggcatcgtc
gacaccacgccggacgcctgcccgatcatttcgaaaaccccggtaccgaacatgttcttc
aactgcggttggggcaccggtggcttcaaggcgacacctggctcgggcaacgtgtttgcc
gcaagcctggccaagggtgaaatgcacccgctggccgcacctttctccatcgaccgtttc
cacaacggtgcgttgatcgacgaacacggcgctgcggctgtcgcccactaa
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