KEGG   Pseudozyma flocculosa: PFL1_05172
Entry
PFL1_05172        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03020  RNA polymerase
pfp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PFL1_05172
  09124 Replication and repair
   03420 Nucleotide excision repair
    PFL1_05172
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfp03021]
    PFL1_05172
   03400 DNA repair and recombination proteins [BR:pfp03400]
    PFL1_05172
Transcription machinery [BR:pfp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PFL1_05172
DNA repair and recombination proteins [BR:pfp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PFL1_05172
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom DUF2197 DZR Lar_restr_allev zf-TFIIB C1_1 T4_baseplate HVO_2753_ZBP zf-ribbon_3
Other DBs
NCBI-GeneID: 19319270
NCBI-ProteinID: XP_007880893
UniProt: A0A061H4B4
LinkDB
Position
Unknown
AA seq 133 aa
MSSLNFCAECNNLLYPEVDRTNHVLLYACRNCNYSEEARQSLVFRNDLMSVTKEQPGVID
NLMKDPTLARTQDLSCPDCGHSEAVVFQDQSKRILNRMILFYVCTRCNHLFRDPPQQAPT
TGPGQVWNDRKKK
NT seq 402 nt   +upstreamnt  +downstreamnt
atgtcgtcgctcaacttctgcgcagagtgcaacaacctcctctatccagaggtcgatcgc
accaaccacgtcctcctctatgcctgccgcaactgcaactactcggaagaggcacggcag
tcgctcgtctttcgcaacgatcttatgagcgtcacaaaggaacaaccgggcgtcatcgac
aacctcatgaaggaccctaccttggctagaacacaggacctctcgtgtcccgactgcggt
cactcggaagcggtagtctttcaggaccagtcgaaacgaatcctcaaccgaatgatcctc
ttctacgtctgcacgcgctgcaaccacctcttccgcgacccaccacaacaggcccctacc
accggcccgggacaggtgtggaacgaccgcaagaaaaagtaa

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