Pseudozyma flocculosa: PFL1_06386
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Entry
PFL1_06386 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K02328
DNA polymerase delta subunit 2
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03030
DNA replication
pfp03410
Base excision repair
pfp03420
Nucleotide excision repair
pfp03430
Mismatch repair
pfp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFL1_06386
03410 Base excision repair
PFL1_06386
03420 Nucleotide excision repair
PFL1_06386
03430 Mismatch repair
PFL1_06386
03440 Homologous recombination
PFL1_06386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfp03032
]
PFL1_06386
03400 DNA repair and recombination proteins [BR:
pfp03400
]
PFL1_06386
DNA replication proteins [BR:
pfp03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
PFL1_06386
DNA repair and recombination proteins [BR:
pfp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
PFL1_06386
MMR (mismatch excision repair)
DNA polymerase delta complex
PFL1_06386
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
19320464
NCBI-ProteinID:
XP_007882118
UniProt:
A0A061H1Z8
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MTTAPPLSRKQAAHTDVAALRKPLVVPLGSRSYAKQFAQLYDYRLSYLNKRILHRAHAKW
VQGFSSFSQSQSQAALAQGDQDDDHEDDDDDDDPGAHTEAGPSSRKRSRVSMAHPPKHTQ
RILDVRQGEVCYIVGNLYCAMPLKPDVLEDLTREQWLAPQPARTKFVDPARDELYIEDQS
GRVKLVGDAIRPGGRLRPMLITGAVAAVLGTETRAGDFEVVDAVFASLPDASPASAAKDE
ASDDSVMDGGRDDDAADDGWVVIMSGLAIGGDDSLESEVAMQFLTEWLTGELGSGEDREA
SSKVVAAIIAGNSMAPPVRNEDETKTKRFGQDVPTYSAAPTLALDQFLTDLCSTMPVHIL
PGERDPASVAMPQQPIHFALLPRAGRFDSLHRETNPTWIGLDGCRILGTSGQNVDDIFKY
VEEGDDGRVEMACRVLEWGHLAPTAPDTLWCYPFKATDPFLIRQRPDVMFLGNQPAYGTA
LYRFDEDESGGGGGGGGDGDDDEGLEGHGSQGSPATAGRGWKGRACRVVLVPEFVKTHQV
VLVNLRSLESRVVDVGTRI
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgcaccaccgctgtcgcgcaagcaggcggcgcacaccgacgtcgccgcgctg
cgcaagcctctcgtcgtacccctcggctcccgctcctatgcaaagcagtttgcccagctc
tacgactaccgcctctcgtacctcaacaagcgcatcctccacagggcacacgccaagtgg
gtgcagggcttcagctcgttttcacagagccagtcccaggctgccctcgcccagggtgac
caggatgacgaccacgaggacgacgacgacgacgacgaccccggcgcccacaccgaagct
ggcccgtcgtctaggaagcggtcacgcgtatccatggcgcacccccccaagcacacccag
cgcatcctcgatgtaaggcagggcgaggtatgctacatcgtcggcaacctctactgcgca
atgccccttaagccagacgtcctcgaggacctcaccagagagcaatggctcgccccgcag
cccgcacgcaccaagttcgtcgacccggcccgcgacgagctctacatcgaggaccagagc
ggcagggtcaagctcgtcggcgacgccatcaggccgggcggacggctgcggcccatgctc
atcacgggcgcagtcgccgccgtgctcggcacagagacgcgcgcgggagactttgaagtc
gtagacgccgtcttcgcaagcctccccgacgcatcgcccgcatcggcagccaaggacgag
gccagcgatgacagcgtcatggacggaggcagggacgacgacgcagcagacgacggctgg
gtcgtcatcatgagtggactcgccatcggcggagacgacagcctcgagagcgaagtcgcc
atgcagttcctcacagagtggctcaccggcgagctcgggagcggcgaggaccgcgaggcg
agctccaaggtcgtcgccgccatcattgccggcaactcgatggccccgcccgtccgcaac
gaagacgagacaaagacgaaacgcttcgggcaagacgtgcccacctactcggccgcgccg
acgctggcgctcgaccagttcctgaccgacctctgctcgacgatgcccgtccacatcctg
ccgggcgagcgcgacccggcgtcggtggccatgccgcagcagcccatccactttgccctg
ctgccgcgcgccggccgcttcgactcgctccaccgcgagaccaatccgacttggatcggc
ctcgacggctgccgcatcctcggcacctcgggccagaacgtcgacgatatcttcaaatac
gtcgaggagggcgacgacgggcgcgtcgagatggcctgccgcgtcctcgagtggggacac
cttgccccgacggcgcccgacacgctttggtgctatccgttcaaggcgaccgatccgttc
ctgatccgccaacggccggacgtcatgtttctcggcaaccagccggcgtacggcacggcc
ctctaccgcttcgacgaggacgagagcggcggcggcggcggcggcggcggcgacggcgat
gacgacgaggggttagaggggcatgggtcgcagggctcccccgcgacggccggccgaggg
tggaagggcagggcgtgccgcgtcgtcctggtgcccgagtttgtcaagacgcaccaggtg
gtgctggtcaacctgcgcagcctcgagagccgcgtcgtcgacgtcgggacgaggatctag
DBGET
integrated database retrieval system