KEGG   Pseudozyma flocculosa: PFL1_06792
Entry
PFL1_06792        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PFL1_06792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfp03021]
    PFL1_06792
Enzymes [BR:pfp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PFL1_06792
Transcription machinery [BR:pfp03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     PFL1_06792
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 DUF2225
Other DBs
NCBI-GeneID: 19320863
NCBI-ProteinID: XP_007882529
UniProt: A0A061H1K5
LinkDB
Position
Unknown
AA seq 1400 aa
MKELVSQDAPKKIKHIQFGVLSQQDIVNMSEIEITTRDLYTIGEAERKPVANGVLDRRLG
ISDKNSLCETCHLKMADCVGHYGYIKLVLPVFHVGFFKHTVSILQSICKNCAHVLLEEPD
RRKYLRRFRRPNLENLQRTRTFKEVNTRARKVLYCPKCGYTNGTVKKQGQLKIVHEKFRA
KKTAAELEEFRSTFTTNVRMGNGDITPHLSKAQEDLNPLKVLDLFKRISDEDCELLGLRP
EFGRPEEYIWQYVCVPPVCIRPSVAQDGATNEDDVTIKLTEIIFTNSLLKIGLVKGGKGT
TTSQLVQQWDFLQLTVALYINSELPGVPSQPGQKPSRGFCQRLKGKQGRFRGNLSGKRVD
FSGRTVIGPDPNLKIDEVAVPERVAKILTYPERVFVHNIERMRQAVRNGTDVHPGANYLQ
DGKTGFKRFLKFPGMREELAQKLRVGDIVERHLRDGDIVLFNRQPSLHKLSIMSHRAKVR
PWRTFRLNECACNPYNADFDGDEMNLHVPQTEEARTEATTLMGVKHNLVTPRNGEPIIAA
IQDFITASFLISKRDRFFDRAQFSQVCSYFADADLQIDIPPPAIQKPVRLWTGKQVMGCL
IRPNRRSPHLVNLEAQCRTFEKPKNGHPKDMSPNDGWLVIVNSEVMCGVFDKSTVGDGKK
NSVFGVMLRDYGPDAAITAMNRLAKTCARWLANQGFSLGINDVIPGPRLRDNKDAKVETA
YAECLDLIEKAKHGKLENLPGCDQEQTLENMISGVLSAVRADVGEICMTELSRHNAPLVM
AVCGSKGSKINVAQMVACVGQQIIAGSRVKNGFQDRSLPHFPKKSKDPPSRGFVRNSFFS
GLTPSEFLFHAISGREGLVDTAVKTAETGYMARRLMKALEDLSTHYDISVRNSVGTVVQF
VYGDDGLDPAELEGDALPVEYFRSWRHSLAITHHIPGRGLMPYEMGEIVDRELNSPRFVN
TCTEKYREQVRSFLFDNVVRRAAEIREHFGMWPALERMDEWDEDTDLSMGADSEQHAVVN
NKTKVKEAALLEFLDECWVKYMKARVEPGSAVGAVGAQSIGEPGTQMTLKTFHFAGVASM
NVTLGVPRIKEIINAAKTINTPIISAKLVSERSETAARIVKGRIEKTYLGDIASVIEEAW
AANYTYLGVHIDMDAIRKLQLEVTLNDIKWAIVNAPKLKIREDKIRVVPKRNRIRVYVDG
ESKDGKNDAYYNLKALKRALPSIVVKGISTATRAVISDEKGQRKLLVEGYGLLKVMTTEG
VVGTQTSTNHVMEMQAVLGIESARTSVYNEIETTMSAHGMSIDPRHIMLLADVMTYKGEV
LGITRFGVAKMKDSVLMLASFEKTTDHLFDAALYGKSDEVRGVSESIIMGNPAETVGTGM
AALVVPRPPLPPRRRLVFDR
NT seq 4203 nt   +upstreamnt  +downstreamnt
atgaaggagctcgtcagccaagatgcgcccaagaagatcaagcacatccagttcggcgtg
ctctcgcagcaggacattgtcaacatgtccgagatcgagatcaccacgcgcgacctctat
accattggcgaggccgagcgcaagcccgtcgccaacggcgtcctcgaccgccgcctcggc
atctcggacaagaactcgctctgcgagacgtgccacctcaagatggccgactgcgtaggc
cactacggctacatcaagctcgtcctccccgtcttccacgtcggcttcttcaagcacacc
gtatccatcctccagtcgatctgcaaaaactgcgcccacgtcctcctcgaggagcccgac
cgccgcaagtacctccgccgcttccgccggcccaacctcgagaacctgcagcgcacccgc
accttcaaggaggtcaacacgcgcgcccgcaaggtcctctactgcccaaagtgcggctac
accaacggcaccgtcaagaagcaggggcagctcaagattgtccacgaaaagttccgcgcc
aagaagacggcggccgagctggaagagttccgcagcaccttcaccaccaacgtccgcatg
ggcaacggcgacatcacgccgcacctcagcaaggcccaggaggacctcaacccgctcaag
gtcctcgacctcttcaagcgcatctcggacgaggactgcgagctgctcggcctgcgcccc
gagtttgggcggcccgaggagtacatctggcagtacgtctgcgtgccccccgtctgcatc
cgccccagcgtggcccaggacggcgccaccaacgaggacgacgtcaccatcaagctcacc
gagatcatcttcaccaactcgctcctcaagatcgggctggtcaagggcggcaagggcacc
accaccagccagctcgtccagcagtgggacttcctccagctcaccgtcgccctctacatc
aactcggagctgccgggcgtgcccagccagcccgggcagaagcccagccgcggcttctgc
cagcggctcaagggcaagcagggccgcttccgcggcaacctgtcgggcaagcgcgtcgac
ttttccgggcgcaccgtcatcgggccggaccccaacctcaagatcgacgaggtggccgtg
ccggagcgcgtggccaagatcctcacctacccggagcgggtgtttgtgcacaacattgag
cggatgcggcaggcggtgcgcaacggcaccgacgtccacccgggcgccaactacctccag
gacggcaagacgggcttcaagcgcttcctcaagttccccggcatgcgcgaggagctggcg
cagaagctgcgcgtcggcgacattgtcgagcgccacctccgcgacggcgacattgtcctc
ttcaaccgccagccctcgctgcacaagctgtcgatcatgagccaccgcgcaaaggtgcgc
ccctggcgcacgttccgcctcaacgagtgcgcgtgcaacccctacaacgccgactttgac
ggcgacgagatgaacctccacgtgccccagaccgaggaggcgaggaccgaggcgacgacg
ctcatgggcgtcaagcacaacctcgtcacgccgcgcaacggcgagcccatcatcgccgcc
atccaggactttatcacggcgtcgttcctcatctcgaagcgcgaccgcttcttcgaccgc
gcccagttttcgcaggtgtgctcctactttgccgacgccgacctgcagatcgacatcccg
ccgccggcgatccagaagcccgtgcgcctctggacgggcaagcaggtcatgggctgcctg
atccgccccaaccgcaggtcgccccacctcgtcaacctcgaggcccagtgccgcaccttc
gagaagcccaagaacggccaccccaaggacatgtcgcccaacgacggctggctcgtcatt
gtcaacagcgaggtcatgtgcggcgtcttcgacaagtcgacggtgggcgacggcaagaag
aactcggtgtttggcgtcatgctgcgcgactacgggcccgacgccgccatcacggccatg
aaccggctggccaagacgtgcgcccgctggctcgccaaccagggcttctcgctcggcatc
aacgacgtcatccccggcccgcggctgcgcgacaacaaggacgccaaggtcgagacggcg
tacgccgagtgcctcgacctcatcgaaaaggccaagcacggcaagctcgagaacctgccc
ggctgcgaccaggagcagacgctcgaaaacatgatctcgggcgtcctctcggccgtccgc
gccgacgtcggcgagatctgcatgacggagctcagccggcacaatgcgcccctcgtcatg
gccgtctgcggctccaagggctccaagatcaacgtggcccagatggtggcgtgcgtcggg
cagcagatcattgccggctcgcgtgtcaagaacggcttccaggaccgctcgctgccccac
ttccccaaaaagtccaaggacccgccgtcgcgcggctttgtgcgcaacagcttcttcagc
ggcctcacgccgagcgagttcctcttccacgccatctcgggacgcgagggcctggtcgac
acggcggtcaagacggccgagacgggctacatggcgcgccgcctgatgaaggcgctcgag
gacctgtcgacgcactacgacatctcggtgcgcaactcggtgggcaccgtggtgcagttc
gtctacggcgacgacggcctcgacccggccgagctcgagggcgacgcgctgcccgtcgag
tacttccgctcgtggcgccactcgctcgccatcacgcaccacatccccggccgcggcctg
atgccctacgagatgggcgagattgtcgaccgcgagctcaacagcccgcgcttcgtcaac
acgtgcacggaaaagtaccgcgagcaggtgcgcagcttcctctttgacaacgtcgtcagg
cgcgccgccgagatccgcgagcactttggcatgtggcccgccctcgagcgcatggacgag
tgggacgaggacacggacctgtcgatgggcgccgacagcgagcagcacgccgtcgtcaac
aacaagaccaaggtcaaggaggcggcgctgctcgagttcctcgacgagtgctgggtcaag
tacatgaaggcccgcgtcgagccaggctcggccgtcggagccgtcggcgcgcagtcgatt
ggagagccgggcacccagatgacgctcaagacgttccactttgccggtgtcgcgtcgatg
aacgtgacgctgggtgtgccgcgcatcaaggagattatcaatgcggccaagacgatcaac
acgcccattatctcggccaagctggtgagcgagcggagcgagacggcggcgcgcatcgtc
aaggggcgcatcgaaaagacgtacctgggcgacattgcgtcggtgattgaggaggcgtgg
gcggccaactacacgtacctgggcgtgcacatcgacatggacgcgatccgcaagctgcag
ctcgaggtgacgctcaacgacatcaagtgggcgattgtcaatgcgcccaagctcaagatc
cgcgaggacaagatccgggtggtgccgaagcgcaaccggatccgcgtctacgtcgacggc
gagtccaaggacggcaaaaacgacgcctactacaacctcaaggcgctcaagcgggcgctg
ccgtcgattgtcgtcaagggcatctcgacggcgacgcgggccgtcatcagcgacgaaaag
gggcagcgcaagctgctggtcgaggggtacggcctgctcaaggtgatgacgaccgagggc
gtggtgggcacgcagacgtcgaccaaccacgtcatggagatgcaggcggtgctgggcatc
gagtcggcgcgcacctcggtgtacaacgagattgagacgacgatgtcggcgcacggcatg
tcgattgacccgcggcacattatgctgctggccgacgtcatgacgtacaagggcgaggtg
ctgggcatcacgcggttcggcgtggccaagatgaaggacagcgtgctgatgctggccagc
tttgaaaagacgaccgaccacctctttgacgcggccctctacggcaagtcggacgaggtg
cgcggcgtctcggagagcatcatcatgggcaacccggccgagacggtcggtacgggcatg
gccgccctcgtcgtcccgcggccgccgctgccgccgcgcaggaggctcgtattcgaccgg
tga

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