Pseudozyma flocculosa: PFL1_06792
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Entry
PFL1_06792 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PFL1_06792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfp03021
]
PFL1_06792
Enzymes [BR:
pfp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PFL1_06792
Transcription machinery [BR:
pfp03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
PFL1_06792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF2225
Motif
Other DBs
NCBI-GeneID:
19320863
NCBI-ProteinID:
XP_007882529
UniProt:
A0A061H1K5
LinkDB
All DBs
Position
Unknown
AA seq
1400 aa
AA seq
DB search
MKELVSQDAPKKIKHIQFGVLSQQDIVNMSEIEITTRDLYTIGEAERKPVANGVLDRRLG
ISDKNSLCETCHLKMADCVGHYGYIKLVLPVFHVGFFKHTVSILQSICKNCAHVLLEEPD
RRKYLRRFRRPNLENLQRTRTFKEVNTRARKVLYCPKCGYTNGTVKKQGQLKIVHEKFRA
KKTAAELEEFRSTFTTNVRMGNGDITPHLSKAQEDLNPLKVLDLFKRISDEDCELLGLRP
EFGRPEEYIWQYVCVPPVCIRPSVAQDGATNEDDVTIKLTEIIFTNSLLKIGLVKGGKGT
TTSQLVQQWDFLQLTVALYINSELPGVPSQPGQKPSRGFCQRLKGKQGRFRGNLSGKRVD
FSGRTVIGPDPNLKIDEVAVPERVAKILTYPERVFVHNIERMRQAVRNGTDVHPGANYLQ
DGKTGFKRFLKFPGMREELAQKLRVGDIVERHLRDGDIVLFNRQPSLHKLSIMSHRAKVR
PWRTFRLNECACNPYNADFDGDEMNLHVPQTEEARTEATTLMGVKHNLVTPRNGEPIIAA
IQDFITASFLISKRDRFFDRAQFSQVCSYFADADLQIDIPPPAIQKPVRLWTGKQVMGCL
IRPNRRSPHLVNLEAQCRTFEKPKNGHPKDMSPNDGWLVIVNSEVMCGVFDKSTVGDGKK
NSVFGVMLRDYGPDAAITAMNRLAKTCARWLANQGFSLGINDVIPGPRLRDNKDAKVETA
YAECLDLIEKAKHGKLENLPGCDQEQTLENMISGVLSAVRADVGEICMTELSRHNAPLVM
AVCGSKGSKINVAQMVACVGQQIIAGSRVKNGFQDRSLPHFPKKSKDPPSRGFVRNSFFS
GLTPSEFLFHAISGREGLVDTAVKTAETGYMARRLMKALEDLSTHYDISVRNSVGTVVQF
VYGDDGLDPAELEGDALPVEYFRSWRHSLAITHHIPGRGLMPYEMGEIVDRELNSPRFVN
TCTEKYREQVRSFLFDNVVRRAAEIREHFGMWPALERMDEWDEDTDLSMGADSEQHAVVN
NKTKVKEAALLEFLDECWVKYMKARVEPGSAVGAVGAQSIGEPGTQMTLKTFHFAGVASM
NVTLGVPRIKEIINAAKTINTPIISAKLVSERSETAARIVKGRIEKTYLGDIASVIEEAW
AANYTYLGVHIDMDAIRKLQLEVTLNDIKWAIVNAPKLKIREDKIRVVPKRNRIRVYVDG
ESKDGKNDAYYNLKALKRALPSIVVKGISTATRAVISDEKGQRKLLVEGYGLLKVMTTEG
VVGTQTSTNHVMEMQAVLGIESARTSVYNEIETTMSAHGMSIDPRHIMLLADVMTYKGEV
LGITRFGVAKMKDSVLMLASFEKTTDHLFDAALYGKSDEVRGVSESIIMGNPAETVGTGM
AALVVPRPPLPPRRRLVFDR
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagctcgtcagccaagatgcgcccaagaagatcaagcacatccagttcggcgtg
ctctcgcagcaggacattgtcaacatgtccgagatcgagatcaccacgcgcgacctctat
accattggcgaggccgagcgcaagcccgtcgccaacggcgtcctcgaccgccgcctcggc
atctcggacaagaactcgctctgcgagacgtgccacctcaagatggccgactgcgtaggc
cactacggctacatcaagctcgtcctccccgtcttccacgtcggcttcttcaagcacacc
gtatccatcctccagtcgatctgcaaaaactgcgcccacgtcctcctcgaggagcccgac
cgccgcaagtacctccgccgcttccgccggcccaacctcgagaacctgcagcgcacccgc
accttcaaggaggtcaacacgcgcgcccgcaaggtcctctactgcccaaagtgcggctac
accaacggcaccgtcaagaagcaggggcagctcaagattgtccacgaaaagttccgcgcc
aagaagacggcggccgagctggaagagttccgcagcaccttcaccaccaacgtccgcatg
ggcaacggcgacatcacgccgcacctcagcaaggcccaggaggacctcaacccgctcaag
gtcctcgacctcttcaagcgcatctcggacgaggactgcgagctgctcggcctgcgcccc
gagtttgggcggcccgaggagtacatctggcagtacgtctgcgtgccccccgtctgcatc
cgccccagcgtggcccaggacggcgccaccaacgaggacgacgtcaccatcaagctcacc
gagatcatcttcaccaactcgctcctcaagatcgggctggtcaagggcggcaagggcacc
accaccagccagctcgtccagcagtgggacttcctccagctcaccgtcgccctctacatc
aactcggagctgccgggcgtgcccagccagcccgggcagaagcccagccgcggcttctgc
cagcggctcaagggcaagcagggccgcttccgcggcaacctgtcgggcaagcgcgtcgac
ttttccgggcgcaccgtcatcgggccggaccccaacctcaagatcgacgaggtggccgtg
ccggagcgcgtggccaagatcctcacctacccggagcgggtgtttgtgcacaacattgag
cggatgcggcaggcggtgcgcaacggcaccgacgtccacccgggcgccaactacctccag
gacggcaagacgggcttcaagcgcttcctcaagttccccggcatgcgcgaggagctggcg
cagaagctgcgcgtcggcgacattgtcgagcgccacctccgcgacggcgacattgtcctc
ttcaaccgccagccctcgctgcacaagctgtcgatcatgagccaccgcgcaaaggtgcgc
ccctggcgcacgttccgcctcaacgagtgcgcgtgcaacccctacaacgccgactttgac
ggcgacgagatgaacctccacgtgccccagaccgaggaggcgaggaccgaggcgacgacg
ctcatgggcgtcaagcacaacctcgtcacgccgcgcaacggcgagcccatcatcgccgcc
atccaggactttatcacggcgtcgttcctcatctcgaagcgcgaccgcttcttcgaccgc
gcccagttttcgcaggtgtgctcctactttgccgacgccgacctgcagatcgacatcccg
ccgccggcgatccagaagcccgtgcgcctctggacgggcaagcaggtcatgggctgcctg
atccgccccaaccgcaggtcgccccacctcgtcaacctcgaggcccagtgccgcaccttc
gagaagcccaagaacggccaccccaaggacatgtcgcccaacgacggctggctcgtcatt
gtcaacagcgaggtcatgtgcggcgtcttcgacaagtcgacggtgggcgacggcaagaag
aactcggtgtttggcgtcatgctgcgcgactacgggcccgacgccgccatcacggccatg
aaccggctggccaagacgtgcgcccgctggctcgccaaccagggcttctcgctcggcatc
aacgacgtcatccccggcccgcggctgcgcgacaacaaggacgccaaggtcgagacggcg
tacgccgagtgcctcgacctcatcgaaaaggccaagcacggcaagctcgagaacctgccc
ggctgcgaccaggagcagacgctcgaaaacatgatctcgggcgtcctctcggccgtccgc
gccgacgtcggcgagatctgcatgacggagctcagccggcacaatgcgcccctcgtcatg
gccgtctgcggctccaagggctccaagatcaacgtggcccagatggtggcgtgcgtcggg
cagcagatcattgccggctcgcgtgtcaagaacggcttccaggaccgctcgctgccccac
ttccccaaaaagtccaaggacccgccgtcgcgcggctttgtgcgcaacagcttcttcagc
ggcctcacgccgagcgagttcctcttccacgccatctcgggacgcgagggcctggtcgac
acggcggtcaagacggccgagacgggctacatggcgcgccgcctgatgaaggcgctcgag
gacctgtcgacgcactacgacatctcggtgcgcaactcggtgggcaccgtggtgcagttc
gtctacggcgacgacggcctcgacccggccgagctcgagggcgacgcgctgcccgtcgag
tacttccgctcgtggcgccactcgctcgccatcacgcaccacatccccggccgcggcctg
atgccctacgagatgggcgagattgtcgaccgcgagctcaacagcccgcgcttcgtcaac
acgtgcacggaaaagtaccgcgagcaggtgcgcagcttcctctttgacaacgtcgtcagg
cgcgccgccgagatccgcgagcactttggcatgtggcccgccctcgagcgcatggacgag
tgggacgaggacacggacctgtcgatgggcgccgacagcgagcagcacgccgtcgtcaac
aacaagaccaaggtcaaggaggcggcgctgctcgagttcctcgacgagtgctgggtcaag
tacatgaaggcccgcgtcgagccaggctcggccgtcggagccgtcggcgcgcagtcgatt
ggagagccgggcacccagatgacgctcaagacgttccactttgccggtgtcgcgtcgatg
aacgtgacgctgggtgtgccgcgcatcaaggagattatcaatgcggccaagacgatcaac
acgcccattatctcggccaagctggtgagcgagcggagcgagacggcggcgcgcatcgtc
aaggggcgcatcgaaaagacgtacctgggcgacattgcgtcggtgattgaggaggcgtgg
gcggccaactacacgtacctgggcgtgcacatcgacatggacgcgatccgcaagctgcag
ctcgaggtgacgctcaacgacatcaagtgggcgattgtcaatgcgcccaagctcaagatc
cgcgaggacaagatccgggtggtgccgaagcgcaaccggatccgcgtctacgtcgacggc
gagtccaaggacggcaaaaacgacgcctactacaacctcaaggcgctcaagcgggcgctg
ccgtcgattgtcgtcaagggcatctcgacggcgacgcgggccgtcatcagcgacgaaaag
gggcagcgcaagctgctggtcgaggggtacggcctgctcaaggtgatgacgaccgagggc
gtggtgggcacgcagacgtcgaccaaccacgtcatggagatgcaggcggtgctgggcatc
gagtcggcgcgcacctcggtgtacaacgagattgagacgacgatgtcggcgcacggcatg
tcgattgacccgcggcacattatgctgctggccgacgtcatgacgtacaagggcgaggtg
ctgggcatcacgcggttcggcgtggccaagatgaaggacagcgtgctgatgctggccagc
tttgaaaagacgaccgaccacctctttgacgcggccctctacggcaagtcggacgaggtg
cgcggcgtctcggagagcatcatcatgggcaacccggccgagacggtcggtacgggcatg
gccgccctcgtcgtcccgcggccgccgctgccgccgcgcaggaggctcgtattcgaccgg
tga
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