Pragia fontium: QQ39_17015
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Entry
QQ39_17015 CDS
T03952
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pfq
Pragia fontium
Pathway
pfq00540
Lipopolysaccharide biosynthesis
pfq01100
Metabolic pathways
pfq01250
Biosynthesis of nucleotide sugars
Module
pfq_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
QQ39_17015 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pfq01005
]
QQ39_17015 (rfaD)
Enzymes [BR:
pfq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
QQ39_17015 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pfq01005
]
Core region
QQ39_17015 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
Motif
Other DBs
NCBI-ProteinID:
AKJ43976
UniProt:
A0A0G3CPP5
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All DBs
Position
3903808..3904743
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AA seq
311 aa
AA seq
DB search
MIIVTGGAGLIGSNIIRALNKTGYQDILVVDNLKDGTKFANLVDLEIADYIDKEDFIAHI
LAGDDLGDIDAVFHQGACSATTEWDGKYMMDNNYQYSKDVLHYCLDRQIPFLYASSAATY
GGRSDNFIEERQFEQPLNVYGYSKFLFDQYVRQILPQAESQICGFRYFNVYGPGENHKGS
MASVAFHLNNQINKGENPKLFSGSEGFKRDFIYVGDVADMNLWFWKNGTSGIFNCGTGRA
ESFQAVADAVLAFHKTGHVEYIPFPEHLKGRYQSYTQADLTKLKATGYDLPFKTVAEGVA
EYMAWLNKDRA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtaactggcggcgcaggacttatcggcagcaacattattagagcattaaac
aaaaccggatatcaggatattttagttgttgataacctaaaagacggaacaaaattcgcc
aatctggtggatttagaaattgctgattatattgataaagaagactttatcgcccatatt
ctggctggtgacgatctgggtgatattgacgcagtattccatcagggagcctgctctgcc
accaccgagtgggatggtaaatatatgatggacaataactatcagtactcaaaagatgtc
ctgcattattgtctggatcgccagatcccattcctctatgcctcatctgccgcgacctac
ggtggccgcagcgataactttattgaagaacgtcagtttgaacagccgctaaacgtttac
ggctactcaaaattcctgtttgatcaatatgttcgccagatattgccacaggctgaatct
caaatttgcggattccgttattttaacgtgtatggcccaggtgaaaatcataagggcagt
atggccagcgtcgctttccatctcaataaccaaatcaacaaaggtgaaaatccaaagctg
ttctctggcagtgaaggttttaaacgagactttatctacgttggcgatgtcgccgatatg
aacctgtggttttggaaaaatggcacctccggaatttttaactgtggaacaggccgtgca
gaatccttccaggccgttgctgatgcggtattagccttccataaaacgggacatgtagaa
tatattccattccccgaacacctgaagggtcgttatcaatcctatactcaagcagaccta
accaagttaaaagctaccggatacgatttgccattcaaaacggttgctgaaggagttgca
gaatatatggcttggttaaacaaagatcgggcatag
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