Peribacillus frigoritolerans: L8956_18285
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Entry
L8956_18285 CDS
T08180
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
pfri
Peribacillus frigoritolerans
Pathway
pfri00860
Porphyrin metabolism
pfri01100
Metabolic pathways
pfri01110
Biosynthesis of secondary metabolites
pfri01120
Microbial metabolism in diverse environments
pfri01240
Biosynthesis of cofactors
Module
pfri_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
pfri_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
pfri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
L8956_18285 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfri04147
]
L8956_18285 (hemB)
Enzymes [BR:
pfri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
L8956_18285 (hemB)
Exosome [BR:
pfri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
L8956_18285 (hemB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
DUF3502
Motif
Other DBs
NCBI-ProteinID:
ULM95769
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All DBs
Position
complement(3855306..3856298)
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AA seq
330 aa
AA seq
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MKNIPFNRHRRLRASAGMRALVRETQLHKEDLIYPIFVIDGKNVKNEINSMPGIYQLSMD
NLGAEMDEVVSLGIKSVILFGVPFDHDKDEQGTGAFHHNGLVQEATRFIKKQYPEVIVIA
DTCLCEYTSHGHCGVVEGEKILNDASLDLLAKTAISQAEAGADIIAPSNMMDGFVAAIRA
GLDEAGYEDIPIMSYAVKYASAFYGPFRDAANGAPQFGDRKTYQMDPANRLEAFREAESD
VAEGADFLIVKPALSYMDIIRDVKNNFNLPIVSYNVSGEYSMVKAAAQNGWIDEKAIVME
MLTGLKRAGSDLIITYFSKDVARWINEDNQ
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacattccattcaatcgccaccgccgcttgcgtgcaagtgctggcatgagggct
ttagtccgtgaaacacaattgcataaagaggatttgatttatccgatcttcgtaatcgac
gggaaaaatgtgaaaaatgaaatcaactccatgccaggtatctatcagctatctatggat
aatctgggtgccgaaatggatgaagtcgtgagtctgggcattaaatcagtcattttattc
ggtgtcccttttgatcatgataaagacgaacagggaacaggggcatttcatcacaacgga
cttgtgcaagaagcaacccgctttattaaaaaacaatatcctgaagttattgtcatagcg
gatacctgcctttgcgagtatacaagccatggccattgcggggtcgttgaaggggaaaaa
atccttaatgacgcttctcttgaccttcttgccaaaacggcaatcagccaggctgaggcc
ggcgcagacatcattgctccttccaatatgatggacggtttcgttgcggccatccgtgca
ggtctggatgaagcgggttatgaagatattccgatcatgtcctatgcggtgaaatatgct
tcggctttttacggcccattccgtgatgccgcgaatggtgcgccgcaatttggcgacagg
aaaacttaccaaatggatcccgccaatcgccttgaagcgtttcgtgaagctgaaagcgat
gttgctgaaggtgcggacttcctaatcgtgaaaccggccctttcctacatggacatcatc
agggacgttaagaataactttaatcttccgatcgtttcctataatgtcagcggtgaatat
tcaatggtcaaagctgctgcccaaaacggctggattgatgaaaaagcgatagtgatggaa
atgctgacaggcttgaaacgcgcaggttccgacttgatcatcacgtatttttcaaaagat
gtagcacgctggattaacgaagataatcaatga
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