Peribacillus frigoritolerans: L8956_25765
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Entry
L8956_25765 CDS
T08180
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pfri
Peribacillus frigoritolerans
Pathway
pfri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pfri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L8956_25765 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfri03021
]
L8956_25765 (rpoE)
03400 DNA repair and recombination proteins [BR:
pfri03400
]
L8956_25765 (rpoE)
Transcription machinery [BR:
pfri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
L8956_25765 (rpoE)
DNA repair and recombination proteins [BR:
pfri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
L8956_25765 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
ULM97105
LinkDB
All DBs
Position
complement(5392423..5393013)
Genome browser
AA seq
196 aa
AA seq
DB search
MSLKQYSKEQLLEMSLIEMAYDLLVERNEPIPFKDLISELASLHHLSKAEVEKKIAQFYT
DLNVDGRFTSLGDNRWGLKTWYPVDQIEEEVVHVVKPKKKKKAKKAAVVIDDFDELEDED
LDFEEDIDDLDEDEDDDDDDILGSPVIDEVLLDDDVDDDDDLEEEIIEDDAFVLEDDEDE
DEDEDDLDDLNEEDEK
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttaaaacaatactcaaaagagcaattattggaaatgtccttaatagagatggca
tatgatttgttagttgaaagaaatgaaccgattccatttaaagacttaattagtgaatta
gcttcgcttcaccatttatccaaagcggaagtggaaaagaaaattgcccaattctatacg
gatttaaatgtggatggccgtttcacttcacttggagacaaccgctggggattgaaaaca
tggtacccggttgaccaaatcgaagaagaagtcgtacatgttgtaaaacctaaaaagaaa
aagaaagccaaaaaggctgctgtcgtcatcgatgatttcgatgaacttgaagacgaagac
cttgactttgaagaggatatcgatgatctggacgaggatgaagatgacgacgatgatgat
attctaggttctccagtcatcgacgaagtgcttttggatgatgacgtggatgatgacgac
gacctggaagaagaaataatcgaagatgatgcatttgtcctggaagatgatgaggacgaa
gatgaagacgaagatgacttggatgacttgaatgaagaggatgagaaataa
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