KEGG   Pestalotiopsis fici: PFICI_08929
Entry
PFICI_08929       CDS       T04924                                 
Name
(RefSeq) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
pfy  Pestalotiopsis fici
Pathway
pfy03020  RNA polymerase
pfy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PFICI_08929
  09124 Replication and repair
   03420 Nucleotide excision repair
    PFICI_08929
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfy03021]
    PFICI_08929
   03400 DNA repair and recombination proteins [BR:pfy03400]
    PFICI_08929
Transcription machinery [BR:pfy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     PFICI_08929
DNA repair and recombination proteins [BR:pfy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PFICI_08929
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac Calycin_like
Other DBs
NCBI-GeneID: 19273942
NCBI-ProteinID: XP_007835701
UniProt: W3X1N1
LinkDB
Position
Unknown
AA seq 336 aa
MDYDAMDMDMDTSGPSVKISEADSTHVNFELSNTDLAFANALRRIIMAEVPTVAIDLVEF
HVNTSVLADEFIAHRLGLIPLDSRDIKDMMMPRDCECDGHCDKCSVVLTLHAKCTGDEIM
KVHANQFEISPERVNQTVGTPVITDPDGLGPLICKLRKGQELHIECIARKGIAKEHAKWM
ATSAVGFEYDPHNKLHHLDLWYEADPAAEWPKSKYADWEDPPQEGEPFDYDALPEKFYFE
VEGVSNLDPDGIIKEGIQELQEKLARIMQGLGDSEGLDGQQYDGPQSPGGDMGGPPPWQS
EGYTTPYGGGNQSAWGGAQTAYGTTPYGNSGGSGWS
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggattacgatgcgatggacatggacatggacacttctggtccctctgtcaagatctct
gaggcagacagcacgcacgtcaactttgagctatcgaataccgatcttgcctttgcaaat
gccctgcgccgcatcatcatggccgaagttcctaccgtcgccatcgacctggtcgaattc
cacgtcaatacttcagtcttagccgacgaattcattgcgcaccgactcggtttgattccc
ctcgactccagagacatcaaggatatgatgatgcctcgggactgcgaatgcgacggacac
tgcgacaagtgcagcgttgttctgactctccatgctaagtgtactggcgacgaaattatg
aaagtgcacgccaatcagtttgagatcagccccgagcgcgtcaatcagacggttggaacc
cctgtcatcaccgaccccgatggcctcggtccgttgatttgcaaattgcgtaaaggtcaa
gagttgcacattgagtgcattgccagaaagggcattgcaaaggagcatgccaagtggatg
gctacttctgcggtcggctttgaatacgatcctcacaacaagcttcaccatctcgacctc
tggtacgaggccgatcccgcagctgaatggcccaagagcaagtatgccgactgggaggat
cccccgcaagagggcgagccatttgactacgatgctctccctgagaaattctatttcgag
gtcgagggcgttagtaacctggatccagatggcattatcaaggagggaattcaagaacta
caagaaaagcttgcccgaatcatgcagggacttggcgactccgaaggcctggatggacaa
cagtatgatggtccccagagtcctggcggcgacatgggcggccctccaccgtggcaaagc
gaaggttataccaccccatatggaggtggcaatcagagtgcctggggcggtgctcaaaca
gcatatggcaccactccttacggcaattccggtggaagcggttggagctaa

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