Pestalotiopsis fici: PFICI_09434
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Entry
PFICI_09434 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K02328
DNA polymerase delta subunit 2
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03030
DNA replication
pfy03410
Base excision repair
pfy03420
Nucleotide excision repair
pfy03430
Mismatch repair
pfy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFICI_09434
03410 Base excision repair
PFICI_09434
03420 Nucleotide excision repair
PFICI_09434
03430 Mismatch repair
PFICI_09434
03440 Homologous recombination
PFICI_09434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfy03032
]
PFICI_09434
03400 DNA repair and recombination proteins [BR:
pfy03400
]
PFICI_09434
DNA replication proteins [BR:
pfy03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
PFICI_09434
DNA repair and recombination proteins [BR:
pfy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
PFICI_09434
MMR (mismatch excision repair)
DNA polymerase delta complex
PFICI_09434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
19274447
NCBI-ProteinID:
XP_007836206
UniProt:
W3X356
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MASIDEIQGNLLRKPSGEEAEELERTASTYKPLNSFQLAKEKSYQQQYADMYFLRLTKIK
PAVETLAVEAWSDTVVGGEKVKPVDRVLDIRQGELCWTIGTVYMDMALKPNILEDVSKDK
WISAPTSTQKYWSDDGSDAVMLEDESGRIRLVGAALKSVFLVTGCIIAVMGTENANGELE
VYDIKLPDLPPQPDRWALSKPPTTNGTKTSKAKDEDEEMTDSHSRGSGGKVAIVSGLSFS
SSDASHALELNLLLEYLLGEALDPSAQQELAQISRLIIAGNSISLEDRRPVEEQQPERKT
NKKYGYDASSYNALPSQLLDEFLASLLPTMPINMLPGAQDPANASYPQQPVHTAMFPNAR
AYAAVPGSKEAGWLDNVTNPWETELDGWRVLGTGGQNLDDVFKYVDSDDRLGMMEAMCRW
RCCAPTAPDTLWAYPFQDDDPFVMKTCPHLYFVGCQPEFGTKVIHGADGQSVRLITIPSF
KDAKEIVLVDTETLDVSTVKIATL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgatagatgaaattcaaggtaacctcctccgcaagccttcaggcgaggaggcg
gaggagttggaaaggacggcttccacctacaagccgctcaactctttccaattggccaaa
gagaagtcataccaacaacagtatgcggacatgtactttttaaggttgacaaaaatcaag
ccggctgtagagaccttggcggtagaggcctggtccgatactgtcgttggtggtgaaaag
gtcaagccagtcgacagggtcttggacattcggcagggagagctatgctggacaataggc
actgtctacatggatatggcgttgaagcctaatatcctcgaggatgtctcaaaggataaa
tggatctctgcgcccacatcgacacaaaaatactggtctgatgacggctcagatgcggtg
atgctggaagacgaatctggtaggatacgcttggtgggagcagctctcaaatccgtattc
ttggttacaggttgcattatcgctgtcatgggcactgaaaatgcaaatggtgaactagag
gtctatgacatcaagttaccagacctaccaccccaacccgatcgctgggccttgtcgaag
ccgcccacaacgaacggtacaaagacatccaaggccaaagacgaggacgaggagatgacg
gattcccactctcgcgggagtggcggcaaagtggccatcgtctcaggtctgagcttctca
agttccgacgcctcgcacgctctcgagctcaacctgctattggagtacctcctcggcgag
gccttggacccgtctgcgcaacaggaactagcacaaatcagccgtctcattatagcagga
aattcgatctcgttggaagatcgccggcctgtggaggagcaacaaccagagagaaagacg
aacaaaaagtacggctacgacgccagctcgtacaacgcactcccctcgcaactcttggat
gagtttctcgcttcactactccctactatgcccatcaacatgctgccaggtgctcaagat
ccggcgaatgccagctatccccaacaacccgtgcacacggccatgttcccgaatgcaaga
gcatatgccgctgtaccagggtcaaaggaagctggctggctcgacaatgtgacgaatcca
tgggagactgagttggacggatggcgcgtactaggaactggtggccaaaacctggatgat
gtttttaaatatgtcgacagcgatgaccgcttgggaatgatggaggccatgtgcaggtgg
cgctgctgcgccccaacagcgccagatactctctgggcctacccgtttcaggacgatgac
ccatttgtgatgaagacatgtcctcatctctactttgttggctgtcaaccagagttcggc
accaaggtcatccacggtgctgatggacaatctgtacgactcattaccattccgtcgttc
aaagacgccaaagagatcgtcttggtggatacagaaaccttggacgtctcaaccgtcaag
atagctactttataa
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