Pseudomonas fragi: AV641_03850
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Entry
AV641_03850 CDS
T04285
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pfz
Pseudomonas fragi
Pathway
pfz00330
Arginine and proline metabolism
pfz00480
Glutathione metabolism
pfz01100
Metabolic pathways
pfz01110
Biosynthesis of secondary metabolites
pfz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
AV641_03850
09106 Metabolism of other amino acids
00480 Glutathione metabolism
AV641_03850
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
AV641_03850
Enzymes [BR:
pfz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
AV641_03850
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AMB78262
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Position
complement(822862..824025)
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AA seq
387 aa
AA seq
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MSIQVEDYYARETFNKMKAFADTQETPFVVIDTAMISKAYDDLRAGFEFAKVYYAVKANP
AVEIIDLLRDKGSSFDIASIYELDKVMDRGVSPDRISYGNTIKKSKDIRYFYEKGVRLFS
TDSEADLRNIAKAAPGSKIYVRILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVP
YGISFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLE
TYAEEIIRFLKEDFGDELPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVG
KFSGLIETMDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLY
WLSTGAYTTSYSAVEFNGFPPLKSFYL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcaggtcgaagactattacgcgcgcgaaaccttcaacaaaatgaaggctttt
gccgacacccaggaaaccccgttcgtggtgatcgacaccgccatgatcagcaaggcttac
gatgacctgcgcgcaggtttcgagttcgccaaggtgtactacgcggtcaaggccaacccg
gcagtcgaaatcatcgacctgctgcgcgacaagggctcaagcttcgacatcgcgtcgatc
tatgaactggacaaagtgatggatcggggcgtttccccggatcgcatcagctacggcaac
accatcaagaagtccaaggacatccgctacttctacgagaagggcgtgcgcctgttttcc
accgactccgaagctgacctgcgcaacatcgccaaggccgccccgggttcgaaaatctac
gtgcgtatcctcaccgagggctcgactacggctgactggccactgtcgcgcaaattcggc
tgccagaccgatatggccatggatctgctgatccttgcccgcgatctgggcctggtgcct
tacggcatttcgttccacgtgggctcgcagcaacgggacatcagcgtgtgggacgcggcg
attgccaaggtcaaagtgatcttcgagcgcctcaaggaagaagacggcattgttctcaag
ctgatcaacatgggcggcggcttcccggccaactacatcacccgcaccaacagcctggaa
acctacgctgaagagatcatccgtttcctcaaggaagacttcggtgacgaactgccggaa
atcatccttgaacctggccgttcgctaattgccaacgccgggatcctggtcagtgaagtg
gtgctggttgcgcgtaaatcccgtaccgctgtcgagcgctgggtttacaccgatgtgggc
aaattctcgggcctgatcgaaaccatggacgaagccatcaagtttccgatctggactgaa
aagaaaggcgagatggaagaagtggtcatcgccggcccgacctgcgacagcgccgacatc
atgtatgaaaactacaaatacggcctgccactgaacctggcgatcggtgaccgcctgtac
tggctgtccaccggtgcttacaccaccagctacagcgcagttgaattcaatggctttccg
ccgctgaaatccttctacctgtaa
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