KEGG   Phaeobacter inhibens DSM 17395: PGA1_c08870
Entry
PGA1_c08870       CDS       T02192                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pga  Phaeobacter inhibens DSM 17395
Pathway
pga00740  Riboflavin metabolism
pga01100  Metabolic pathways
pga01110  Biosynthesis of secondary metabolites
pga01240  Biosynthesis of cofactors
pga02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pga00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PGA1_c08870 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PGA1_c08870 (ribD)
Enzymes [BR:pga01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PGA1_c08870 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PGA1_c08870 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam XOO_2897-deam
Other DBs
NCBI-ProteinID: AFO90613
UniProt: A0AA86DAV3
LinkDB
Position
915163..916239
AA seq 358 aa
MSLALSLGRRGQGNCWPNPAVGCVIVRDGRIVGRGWTQPGGRPHAEPQALQQAGDLARGA
TVYVSLEPCSHTGKTPPCAQALINAGVARVVAAIEDSDPRVSGHGFAMLRDAGIPVTTGV
CSDAAAWDHAGFFLKTEQGRPFVTLKLASSFDGRIATAAGESKWITGSEARRAVHAMRAR
HDAVMVGGGTARADDPSLTVRDLGVARQPVRVVISRHLDLPLMGQLARSARDIPVWICHG
AGADAERLRAWEGLGAVLLPCAADGLQLDAGDVLQQLGQAGLTRVFCEGGSALAASLLAQ
DLVDELIGFTAGLGIGGDGLSSIGSLGLDALAEAPRFDLIDVRPVGADIQHRWTRSLR
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgtcgctggcactgtcgctggggcggcgtggccaggggaattgctggccgaacccggcc
gtgggctgcgtgatcgtgcgcgacggacgcatcgttggccgtgggtggacccaaccgggt
ggtcgcccccatgctgaaccacaggcgttgcagcaggccggagacctggcccgcggtgca
acggtctatgtctcgctcgaaccttgctctcataccggcaagaccccgccctgcgcgcag
gctctgatcaatgctggcgtggcgcgtgtcgtcgcggcgatcgaggatagcgatccgcgt
gtctcaggccacgggtttgcgatgttgcgtgacgcagggatcccggtcaccaccggggtc
tgttccgatgcggcggcgtgggatcatgccgggttctttctgaagaccgaacagggacgc
ccctttgtcaccctaaagctggcaagcagcttcgacgggcgcattgccaccgctgcgggt
gaaagcaaatggatcaccgggtcggaggcgcggcgggccgtacatgccatgcgggcgcgc
catgatgcggtgatggtaggcggcggcaccgcccgggcggatgatccctcgttgacggtg
cgggatctgggggtggcgcgccaaccggtgcgggtggtgatctcacgccatctggacctg
ccgttgatggggcagttggcgcgcagcgcgcgcgacattccggtctggatctgccacggc
gccggggccgacgccgaacgcctgcgcgcctgggaaggattgggggcggtcttgctgccc
tgcgcggcagatgggctgcagctggatgcgggcgacgtgttgcagcaactggggcaggcg
gggctgacacgggtcttctgcgaggggggcagtgcgcttgcggcctcgcttctggcgcag
gatctggtggatgagctgattggattcaccgccgggttgggtatcggcggcgatggcttg
tcttcaatcggcagcctcgggctggacgcattggctgaggcgccgcgctttgatttgatt
gatgtccgtccggtcggagctgatatccaacaccgctggacgcgttccctgcgctag

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