Phaeobacter inhibens DSM 17395: PGA1_c31780
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Entry
PGA1_c31780 CDS
T02192
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga03030
DNA replication
pga03410
Base excision repair
pga03420
Nucleotide excision repair
pga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PGA1_c31780 (polA)
03410 Base excision repair
PGA1_c31780 (polA)
03420 Nucleotide excision repair
PGA1_c31780 (polA)
03440 Homologous recombination
PGA1_c31780 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pga03032
]
PGA1_c31780 (polA)
03400 DNA repair and recombination proteins [BR:
pga03400
]
PGA1_c31780 (polA)
Enzymes [BR:
pga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PGA1_c31780 (polA)
DNA replication proteins [BR:
pga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PGA1_c31780 (polA)
DNA repair and recombination proteins [BR:
pga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PGA1_c31780 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PGA1_c31780 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AFO92825
LinkDB
All DBs
Position
3321279..3324092
Genome browser
AA seq
937 aa
AA seq
DB search
MTTTPFGTGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLHRYVEGNTGP
DAPTHVAVIFDKGSHTFRNDLYDQYKANREAMPEDLRPQIPLTRTATEAFNIACKEQEGF
EADDIIATLACQARDAGGRVTIISSDKDLMQLVGGGVEMLDAMKNKRIDTDGVFEKFGVG
PDRVVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGSLEDLLNRAEEIKQPKRRQTLIE
NRAQIELSKQLVQLDNNMELDFTLDDLGVRDPDADHLLSFLAEMEFRTLSKRVADQLGKE
APAIVDAPAQSTDTAEAATVADMPFDSSSYECVRDAGALKKWVIQIRERGWVAVDTETTG
FDEMVVDLVGISLCVEPGRACYIPLTHKSGSSDDLFGSDDLADGQMPLQDALDLLKPVLE
DNSILKIGQNMKYDAKIFARRGIDVAPIDDTMLMSYAMHAGQHGHGMDTLSERYLNHTPI
PIKPLLGTGKSAITFDRVPIDDAVAYAAEDADITLRLWQLFKPQLHQSGVTTVYETLERP
LVPVLARMEREGIKVDRDTLSRMSNAFAQKMAGLEAEIHELAGQNFNVGSPKQLGEILFD
KLGMEGGKKGKTGAYATGADILEDLATEHALPGLVLDWRQLSKLKSTYTDALQDHINAET
GRVHTSYVQTGANTGRLASTDPNLQNIPIRSEEGRRIREAFVPEEGNVLLALDYSQIELR
ILAHVAGIDTLKQAFAEGQDIHALTASEMFNVPLEEMTSDIRRQAKAINFGVIYGISGFG
LARNLRIPRAEAQGFIDRYFERFPGIRRYMDETVAFAKEHGHVQTLFGRKIHTPEISAKG
PRAGFAKRAAINAPIQGTAADVIRRAMIRMPAAIAHLPARMLLQVHDELLFEVPEAAVED
TIETASQVMETAADPAVHLDVKLVVDAGRGQNWAEAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccaccccctttggcaccggctgccacctgcatctgatcgacgggtcggccttc
atctttcgcgcctatcacgcgttgccgcccctcacccggaaatctgatgggctgcccatc
ggtgctgtggcgggtttctgcaacatgctgcaccgctatgttgaaggcaacacaggcccg
gacgcgccaacccatgttgcggtgatcttcgacaagggatcgcacacattccgcaatgat
ctttatgatcaatacaaggccaaccgcgaagccatgcccgaggatctgcgcccgcagatc
cccctgacccgcaccgccactgaagcgttcaatattgcctgcaaggaacaggaaggattc
gaggccgacgatattatcgccacgcttgcgtgtcaggcccgcgatgcaggcggccgggtg
acgattatttcctctgacaaggatctgatgcagctggtcggcggtggtgtcgaaatgctg
gacgcgatgaagaataaacgcatcgacaccgatggtgtctttgagaaattcggtgtcggc
ccggaccgtgtggtggatgtccaggcgcttgctggcgactcggtcgacaatgtgcccggc
gcaccggggattgggatcaagacagcagcactgttgatcaacgaatacgggtcgctggag
gacctgttgaaccgcgccgaagagatcaagcaacccaagcgccgccagactctgatcgag
aaccgcgcgcagatcgaactgtcaaagcagctcgtccagctggacaacaatatggagctg
gacttcacactggatgatctgggcgtacgcgacccagatgcagaccatttgctcagcttt
ctggctgagatggagtttcgcactctgtccaagcgtgtcgccgatcaattgggcaaagag
gcgccagccattgtcgacgcccccgcgcagagcaccgacaccgccgaggctgcgactgtg
gcggatatgcccttcgacagcagcagctatgaatgcgtccgtgacgccggggcgctgaaa
aaatgggtgatccagattcgcgaacgcggctgggtggcggtggacacggaaaccactggt
tttgacgagatggtggtggatcttgtgggcatctcgctctgcgtggaaccgggccgcgcc
tgttacatcccgctcacccataaatccggcagcagtgatgatctttttggttctgacgat
ctggcggacgggcagatgcccctgcaggacgcactcgatctgctaaagcccgtgcttgag
gacaacagcatcctcaaaattggccaaaatatgaaatatgacgccaagatttttgcccgc
cgaggcattgatgtggcgccaattgatgacacgatgctgatgtcctatgccatgcacgca
ggtcagcacgggcacggcatggacacactgtcagagcggtatctgaaccacacgccaatc
ccgatcaaacccctgctggggacgggcaaatcggcgatcacctttgaccgtgtacctatt
gacgatgccgtggcctatgccgctgaggacgccgatatcaccctgcgtttgtggcagctg
ttcaagccgcagctgcaccagtcaggcgtcaccacggtctacgagacgctggagcgtccg
ctggtgccagtgcttgcccggatggagcgcgagggtatcaaggttgatcgcgatacgctg
tcgcgtatgtccaacgcttttgcccagaaaatggctgggctggaggccgagattcatgaa
ctggccggccaaaacttcaacgtcgggtcccccaaacagctgggcgagattctgtttgat
aagctcggcatggagggtggcaagaagggcaagaccggcgcttatgccaccggggcggat
attcttgaggacctcgcgaccgaacacgccttaccgggtctggtgttggactggcgccag
ctgagcaagctgaaatcgacctataccgacgcgcttcaggatcatatcaacgccgaaacc
gggcgcgttcacacctcttatgtgcagaccggggccaacaccgggcgcctcgcctcaacc
gatcccaacctgcaaaatatccccatccgctccgaggaagggcgccgcatccgcgaggcc
tttgttccggaggagggcaatgtgcttctggcgctggactacagccagatcgaactgcgt
attcttgcccatgttgcgggaattgacactctcaaacaggcctttgccgaggggcaggat
attcacgccctcacagcgtcagagatgttcaacgtcccgctggaggagatgacatcggac
atccgccgacaggccaaagcgatcaattttggcgtgatttatggtatttccggctttggt
ctggcccgtaacctgcgcatcccgcgggccgaggcgcagggcttcatcgaccgttatttt
gaacgcttccccggcattcgccgttacatggatgagaccgttgccttcgccaaagagcac
ggccatgtgcaaaccctgttcgggcgcaagatccacacgccggagatttccgccaaggga
ccgcgcgccgggtttgccaaacgcgccgcgatcaatgcgccgatccagggtaccgcagcc
gatgtgatccgccgcgcgatgattcggatgcctgctgccattgctcatctgccggcacgg
atgctgctgcaggttcacgacgaactgctattcgaggtaccggaagccgcggttgaggac
accatcgaaaccgccagtcaggtgatggaaaccgcggcagacccggccgttcatctggac
gtgaaactggtggtggatgcaggcaggggccagaactgggcggaggctcactaa
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