Phaeobacter inhibens DSM 17395: PGA1_c34070
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Entry
PGA1_c34070 CDS
T02192
Symbol
lcfB2
Name
(GenBank) long-chain-fatty-acid-CoA ligase IcfB
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga00280
Valine, leucine and isoleucine degradation
pga01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PGA1_c34070 (lcfB2)
Enzymes [BR:
pga01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
PGA1_c34070 (lcfB2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AFO93043
UniProt:
A0AA86DD97
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All DBs
Position
complement(3571198..3572700)
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AA seq
500 aa
AA seq
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MYDANPLIRHLRAASLDREGALFATRPGADPVGYGELFAGAERMAAALVSRGVAPGDRVA
AQVDKSLAAIQLYLGTVMAGAIFLPLNPAYTEAEVAYFIGDATPRVFVCNPVRHESLRAV
AGEATVLTLDGEGQGSLADLAAGHAGFEPIERKPSDLAAILYTSGTTGRSKGAMLSHENL
YSNSLTLRDYWQFTAEDVLIHALPIFHTHGLFVATNVALLAGAQVVLLPGFDAEAILAAM
PNATALMGVPTFYTRLLVDARLTPDLAANMRLFISGSAPLLVETHEQWEARTGHRILERY
GMTETNMSTSNPYDGVRVAGTVGPPLPGVEARVTLDNAEIPLGEIGVLEVRGPNVFQGYW
QMPEKTAEELRPDGWFITGDLAKIDSNGYVTIVGREKDLVISGGFNVYPKEVETLIDDLP
GVLESAVIGVPHPDFGEAVVAVVVPTEEGTDAASIQAALSEHLAKFKQPKHIALMDELPR
NTMGKVQKKALRETFAQLFT
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgccaatcctctgatccgccacctgcgtgctgcgtccctagatcgcgagggc
gccctgtttgccacccgtcccggagcggatccggttggctatggcgagctgtttgcgggg
gcggaacgtatggcagccgcacttgtttcacgtggagttgcgccgggcgatcgtgtggct
gcgcaggtggataaatccctcgccgcgattcagctctatctgggtacggtgatggccggg
gcaatctttctgccgctcaatccggcctacaccgaagctgaggttgcctatttcatcggg
gatgccacgccgcgtgtgtttgtctgtaaccctgtgcggcacgagagtctgcgcgccgtg
gcgggcgaggccacagtattgacgctggatggtgaagggcagggcagccttgcggatctg
gcggctgggcacgcggggttcgaaccgattgagcggaaaccatcggatctggcggcaatt
ctttatacctcgggcaccacgggccggtccaaaggggcgatgctcagccatgaaaacctc
tattccaactcactgaccctacgcgactactggcagttcaccgccgaagatgtgctaatc
catgcactgccgatctttcacacgcacggtctgttcgttgccaccaatgtggcccttctg
gcgggggcacaggtggtgctgctgcccggttttgatgcggaggcgattctggcagcaatg
ccaaatgccacggcgctgatgggggtgccgaccttctacacgcggcttttggtggacgcg
cggctgacccccgatctggcggccaatatgcggctgttcatttctggctcggcgccactg
ctggtggagacccacgagcagtgggaggcgcgtaccggtcaccgtattctggagcgctac
gggatgaccgaaaccaatatgagcacctcaaacccctatgatggtgtgcgggttgcgggc
actgttggcccgccgctgccaggggttgaggcgcgggtgacgctggacaatgcggagatc
ccgctgggcgaaattggcgtgctggaagtgcgcggcccgaatgtgtttcagggttactgg
cagatgccggagaaaaccgccgaggagttgcgcccggatggctggttcatcaccggcgat
ctcgccaagatcgacagcaacggctacgtcaccatagtgggccgggaaaaggatctggtg
atatccggtggtttcaacgtctacccgaaggaggtcgagacgctgatcgacgatttgccc
ggcgtattggaaagtgcggtgatcggcgtgccgcatcccgatttcggcgaggcggttgtg
gctgtggtggtcccgacagaggaaggcaccgatgctgcatccatccaagcggcgctgtcg
gaacatctggcaaagttcaaacagcccaagcatatcgcgctgatggatgagctgccgcgc
aacaccatgggtaaggtgcagaaaaaagcgctgcgcgagacattcgcccagctgtttacc
tga
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