Plasmodium gaboni: PGSY75_0821600
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Entry
PGSY75_0821600 CDS
T08136
Name
(RefSeq) putative clp1-related protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pgab
Plasmodium gaboni
Pathway
pgab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PGSY75_0821600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgab03019
]
PGSY75_0821600
Enzymes [BR:
pgab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
PGSY75_0821600
Messenger RNA biogenesis [BR:
pgab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
PGSY75_0821600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_N
CLP1_P
AAA_24
nSTAND3
Clp1
CbiA
Motif
Other DBs
NCBI-GeneID:
29775960
NCBI-ProteinID:
XP_018642308
UniProt:
A0A151LNW1
LinkDB
All DBs
Position
8:769753..771786
Genome browser
AA seq
677 aa
AA seq
DB search
MANNGNTRLYHLKAYHELRIVTLEKSTKYNEKEECIKIRVLSNKNIHNKSNDKKNMNDNI
NYSAEIFGKELIIDKEYTFGYNEKFSIYTYTGCYIQIKGMTLQEYESKNNTMKEYVSLCY
ILDAYRKLAKKKKKIGPRILITGNNNSGKSSVSLLLLNYALKSGFKPLYIETDTKASSDK
IELNRGPGVISCFKYDNMNNIENIYPMAATNNTNINININNNNNMNTSNMNNINNNNNIN
NMNSMNSNSNSNSGNTFDLINNNNMFGSYMKYSLEYFFGYYDIKEDINLYYHLNECVSSC
IYLMFLNNINNLSADLRNYSNEQEHICSSGFILNVPSEADHDIIKNLIDIYNINIVIVID
NSFLHYSLKEHYHNVKEDEQEYNNVDPQNNLIKDKKSRQSKRLSEHHSLYDMNVVKDTSL
NNDKRSSIYFNKNKDEEVLYDGEKNEELKTDDYNNINMNNKKDSIYNMNNMYSHYEEDDE
DKKNIQIIGMPKFEGVIPSDNNRIKYCRNLWYYNYFSRDININNYLFKKSHIISFKYSRT
SFIKLDTNLAVPLSALPSDCRDIKRENVSVSYYNGNVKNLMNCILAVSYSKDFSYLHLIN
IAALVHVQGIKEIEQTQQEQDNQKENNNSYDNNDENNNEHNHNQVDYIFDILCPIYITLK
NLPPFFIIPGNIRQMKF
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaatggaaataccagactttatcatctaaaagcgtatcatgaactacgtata
gtgacacttgaaaaatctacaaaatataatgagaaggaagaatgtattaagattcgtgta
ttgtcaaataagaatatacataataaaagtaatgataagaaaaatatgaatgataatata
aattatagtgctgaaatatttggtaaggaattaataatagataaagaatatacatttgga
tacaacgaaaagttttctatatatacatatactggttgttatatacaaataaaaggaatg
acattacaagaatatgaaagtaagaacaatacaatgaaagaatatgtatctctatgttat
atattagatgcctatcgtaagttagcaaaaaaaaaaaaaaaaatcggccctagaatatta
ataactggaaataataattcaggcaaaagttcagtatctttgcttttattaaattatgca
ttgaaatcaggatttaaaccattatatatagaaacagatactaaagctagttctgataag
atagaattaaatcgaggacctggtgtgatcagttgttttaaatatgataatatgaataat
atagaaaatatatatcccatggcagctacaaataacacaaacataaacataaacataaac
aataataataatatgaacacaagtaatatgaataatatcaataataataacaatatcaat
aatatgaacagtatgaatagtaatagtaatagtaatagtggtaacacctttgatttaatt
aataataataatatgtttggctcatacatgaagtattcattagaatatttttttggatat
tatgatattaaagaagatataaacttatattatcatctgaacgaatgtgtaagtagttgt
atatatctaatgtttttaaataatattaataatctatcagctgatttaagaaattatagt
aacgaacaagaacatatatgctcctcaggatttatattaaatgtcccatcagaagcagac
catgatattataaaaaatttgattgatatttataatattaatattgtgattgttatagat
aattcttttttacattattctttaaaagaacattatcataacgttaaagaagatgaacag
gaatataacaatgtggatccacaaaataatttaattaaagataaaaaaagtagacaatcc
aagagattatcagagcaccattcattatatgacatgaacgttgttaaggatacgagtttg
aataatgataagcgcagttcaatttattttaataagaataaggatgaggaggttttatat
gatggtgagaaaaatgaggaattaaaaacagacgattataataacataaacatgaataat
aaaaaagatagtatatacaatatgaacaatatgtatagtcattatgaagaagatgatgag
gataagaaaaatattcaaattattggcatgcctaaatttgaaggtgttattccttctgat
aataatcgtataaaatattgtagaaatttatggtattataattatttttcaagagatata
aatataaataattatctttttaaaaaaagtcatataatatcatttaaatatagtagaacc
agttttataaaactagatacaaatcttgctgtacctttatcagctttaccatctgattgt
agagatataaaaagagaaaatgtatcagttagttattataatggaaatgtaaaaaatcta
atgaactgcattctagcagtatcttattctaaagatttttcatatctacatcttattaat
atagctgcattagtacatgttcagggtattaaagaaattgagcaaacacaacaagaacaa
gataatcaaaaagaaaataataattcttatgataataatgatgaaaataataatgaacac
aatcataatcaggttgattatatttttgatatattatgcccaatatatataacattgaaa
aatttacctccattttttataatacctggaaatataaggcaaatgaagttctaa
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