Pseudomyrmex gracilis (graceful twig ant): 109856389
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Entry
109856389 CDS
T05003
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03440
Homologous recombination
pgc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109856389
03460 Fanconi anemia pathway
109856389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgc03400
]
109856389
Enzymes [BR:
pgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
109856389
DNA repair and recombination proteins [BR:
pgc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
109856389
FA (Fanconi anemia) pathway
Downstream FA components
109856389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
109856389
NCBI-ProteinID:
XP_020287217
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MFATYIIVAVVITFLFTLIKFTIDEWFGNSSMEKQGRLSLKRIHCETYSASEKYNMPDVS
NDESFDLKKENSANVANTDTINKSNNIADPLNVACNLECVHDISDDLSTSEDGIASEESP
EKKTLQTTMFNWHHKPKHLGTKPSTSRYWTEEASHGLGFNKKVPKEASNKKQKFTSEVIN
LDDDDDVTSISSKEADLPPQVAIQHDIMIAGTKVKFPAKPYPCQIAVINSLIQGCNKEQN
CLLESPTGSGKTLALLCGVLAWQDQYEEKLERETKLQNNEMDVDKSCGNNNGSVDNFFLN
SSQYFDERVDKTSDVLKEKLPQKVPKVYYGTRTHKQLEQVIREFRKTAYRYKSMTVLSSR
DHTCIQETRRNKTELCNELLDPRKSSRCPFYNERSKKNMHVFETRLPTPWDIEDLVTLGE
ENTVCPYFGARYLMPLAEIIFCPYNYIVDPDIRESMQINLKGNIVILDEAHNIEDVCRDV
ASVNITNDNLANAITDCENVLGTLNKKLKQNAPYNEDYIAYMTIWEYLGDMAKLLKNFVV
KENGNSQDLVSDCWRGSEFLELFNISNLGRSRFPAVLQASKLAIANFDKAREEMTNPHVL
PTISHDTKKILEHLCFAMQMLMSDSVADDYRVYVVESMEPRRTVSDDIWVSTKSKIRTMK
FMCMNPAVIFAPLAMIVRSVILASGTLAPISSFQSELGTQFPHVLNANHIIPKEQVYVRC
LPCGPNRRTLIATYEHVNSWVFQDELGDLILQVCNAMPYGVLCFFSSYHVMSMFYNRWKN
NGMIRKLSELKEIFTEPRDNKDLPCMMRNYRDVIKKSSLKSYRETSGAILFAVFRGKVAE
GIDFSDNEARCVLTVGIPYSNRNNTDVSMKIAYNDANAAKGLLSGKEWYTVNAFRALNQG
LGRCIRHVKDWGAVLLVDERFQRSQNVSYLPKWIKERRIHSANYDLQTELEDFVALQAAR
ERAENELID
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaacatacatcattgttgctgttgtaatcacgtttttgttcactttgataaaa
ttcacgattgatgagtggtttggaaattcaagcatggaaaaacaagggagattatccttg
aagcgcattcactgtgaaacctattctgcaagtgaaaaatacaacatgccagatgtgtcg
aatgacgagagttttgatttgaagaaagaaaacagtgcaaacgtagcaaatacggacacg
atcaataaatcaaataacatagcagatcctttaaacgtggcatgcaatttggaatgtgtt
catgacatatcggatgacctgagtaccagtgaagatggtattgcaagtgaagagagtcct
gaaaaaaagacacttcaaacgactatgtttaattggcatcataaaccaaaacatcttggt
acaaaacccagcacgagtagatattggactgaagaagcctcgcatgggttgggattcaac
aagaaagttcctaaagaagcaagtaacaaaaaacaaaagtttacaagtgaagtgataaac
ttggatgacgacgatgatgtaacaagcatcagttccaaggaggcagatttgccgccacaa
gttgcaatacaacatgatattatgattgctggaaccaaggtcaaatttcctgccaagccg
tatccgtgtcaaatagcagtgatcaacagtctcattcaagggtgcaacaaagagcagaac
tgtcttctagaaagtcccactgggagcggaaagacactggcgcttctctgcggagtgttg
gcgtggcaggatcaatatgaagagaaacttgagagagagacaaagctgcagaacaacgaa
atggacgtggataaatcgtgcggcaacaacaacggttccgtcgacaatttcttcctaaac
tcatcgcaatacttcgacgaacgcgtcgataaaacctcggacgttttaaaagaaaaactg
ccgcaaaaagtgccgaaagtatattacggaacgcgaacgcacaagcaactcgagcaggta
atcagagaattcaggaaaaccgcgtacagatacaaaagcatgactgtattgagcagtcga
gatcacacgtgcattcaggaaacccgcaggaacaaaaccgagttgtgcaacgaactgctt
gacccgcgcaagtccagcagatgtccgttttacaacgagcgcagtaaaaagaacatgcac
gtgttcgaaacacgactaccgacgccttgggacatagaggatttggttacgttgggtgaa
gagaacacggtctgtccgtatttcggcgcgagatatttgatgcctctggcggaaatcatc
ttttgtccgtacaactacatcgtggatccggacatccgcgagagcatgcagatcaatctg
aaaggcaatattgtgatcctcgacgaggctcacaatatcgaggatgtctgtcgggatgtc
gccagtgtgaatattaccaacgacaatcttgcgaacgccatcacagattgcgaaaatgtt
ctcggaactctaaacaaaaaattgaaacaaaacgcaccgtacaatgaagattacatcgct
tacatgactatttgggagtatctcggcgacatggcgaagttactgaaaaattttgtggtc
aaggaaaatggcaactcgcaagatctcgtcagcgattgttggcgcggttctgaatttctg
gaactgttcaatataagtaacctcggacgctccagatttcccgctgtcctccaagccagt
aaactggctatcgcgaattttgacaaagcgagagaggagatgacgaaccctcacgttttg
cccaccatctcgcacgataccaagaagattctcgagcatctctgtttcgctatgcaaatg
ctcatgtcggatagcgtggctgatgattacagagtttacgttgtggagagcatggaacct
agaaggaccgtgtccgatgacatttgggtctcaacgaagagtaaaatacgcaccatgaag
tttatgtgcatgaatcccgctgtgattttcgcgcctctggccatgatcgttcgttctgtg
atactagcttcgggtacgttggcgccgatctcgtcgttccaaagcgagctcggcacacaa
tttcctcatgtactcaatgcgaatcacattataccgaaggagcaagtgtacgtgaggtgc
ttaccatgtggaccgaatcgaaggactctgattgctacttacgagcacgtgaattcctgg
gtttttcaggacgagctcggtgatctgatccttcaagtgtgcaacgcgatgccgtacggc
gtgctatgtttcttttcctcttatcacgtaatgagcatgttttacaacagatggaagaac
aacggcatgataaggaaactatcggaactcaaggaaattttcacagagccgagagacaac
aaggatctgccgtgcatgatgagaaactatcgcgacgtaattaaaaagtcgtctttgaaa
tcttatcgggaaacatccggagcgattttgttcgcggttttccggggaaaagtcgcggaa
gggatcgatttcagcgacaatgaggctagatgcgtgttaacggtcggcataccgtacagc
aacaggaacaatactgatgtatcgatgaagatagcgtacaatgacgcaaatgctgcgaaa
ggattgctctcaggtaaagagtggtacactgtgaacgcgttcagggccttgaatcaggga
ttgggtcgttgcatcagacatgtaaaggattggggcgcggtgttgctagtggatgaaagg
tttcagaggtcgcagaatgttagctatttgccaaaatggattaaagaaaggcgaatacac
agtgcgaattacgatcttcaaacagaacttgaagatttcgtagctctgcaagctgcgcgt
gaaagagcagagaatgaattaatagattaa
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integrated database retrieval system
