Pseudomyrmex gracilis (graceful twig ant): 109862255
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Entry
109862255 CDS
T05003
Name
(RefSeq) protein VPRBP isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pgc01001
]
109862255
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgc04121
]
109862255
Enzymes [BR:
pgc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
109862255
Protein kinases [BR:
pgc01001
]
Serine/threonine kinases: Other
Other
109862255
Ubiquitin system [BR:
pgc04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
109862255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LisH
Ribosomal_L20
Toprim_4
Motif
Other DBs
NCBI-GeneID:
109862255
NCBI-ProteinID:
XP_020297839
LinkDB
All DBs
Position
Unknown
AA seq
1570 aa
AA seq
DB search
MASTEPGQEVSQILRQWEEEHLSPNYDPTNHLQRLADIIELETENYYKMDPDPFDERHPS
RTDPECNFGQILKVLFRKDNFMTKLINDYLRDTYFSRAGIIGKDVRKLNIAACRVMLDIL
PGLETSAVFQPEMDGLVNRLFSWAEKSIEPLQSYSTGLLAAAMEVQEIATGFREQNSRMI
PLMLQRLHKLQQKAQEDRQQKPHEDRQIINARPFAHFARDRNNVIDIDDTSGGTLKRKTP
DKRRENGTTRESKEFSPNDDDDSICCNSDDAPTSKKRKNDSTESTPVKNNELYPEIMSPP
LSIPKIANSSQFKSGCKSGLCSISSGTHLTAMEGNSNSSWAEMESYVIGNIQMYPPTLAT
RQMLILRYLTPMGEYQEFLAHVFERNALDLILKYINVRETKDSRLAFEALKYLASLLCHK
KFSIEFLNVGGLQRLLDVPRPSVAATGVSICLYYLAYCEDAMERVCLLPKHVISDLVTYA
LWLLERSHDSGRCHATMFFGFSFPFKIILEEFDAQDGLRKLFNVISTLPILNIEEDATIN
DDEECASKQIVRHVAVALKRYMEAHLHLKAEQLQRAENVRTERADAAWQPSIPPYKACKL
SSEEVQAKVEILHDFMSVRSEWPPVEELYRLGGITLLLQIIAFVREWNFTGRMMHTTSSA
ETVRSCLDVIAICSVVPKVMLLLCERIDMPDMTMTTAINLFLAAAECEIIADADVQRAAL
RAIVNCVCAPIARVGGSVARYSVTGSAKKKTTVHNSEELIQKVWECVRSNNGIMVLLQLM
TVKTPITDADSIRALACRALAGLARSEKVRQIISKLPMFTDGQIQSLMKDPILQEKRQEH
VTFQKYALELVERVSGKAKPGAKTGAEYEVSLVSLHRANVVAQTRIQYNEQQLNQLIYQH
LMSKGLTETANTLHREGNLDSAAAIMRSTTTYQPFMYRNPANITPRNGFSLAAFVNLYNS
VRCVPREAALNSCRNNTATPTSSRFVVSHTTSTCSASSPAVNSNIRLKLADCLNQSGVSN
NVNQPIKLQINQKKSISIDRQSPLVASTCQSTTQSTCKSLQKQISRDPGGGGGPGVVPTS
NVSGVVAPNITLDSIITEYLTNQHALCKHPMVTCPQFNLFEPHKCPDPCTKNSSSQNITV
RLTRRVLGMDSRKLDRRYIYSRFCPVKTFRPTEVGGIFTCCTFSPCTQYLILGTHSGDIK
MFNVHTGMEEATYQCHESYVYHTECNKRGNLLLTSTTWRNPMSALWDIGSFFEMKLGFEN
EEYVEFSKLQDRIIGTQGEGATIYDIATAKLLLTLSPSISNQYTKNRATFSMNDELVLSD
GILWDVNSGKEIHKFDKLNQTLNGVFHPNGTEIVSNTEVWDLRTFHLLKTVPTLDEMEVI
FSPVNNIIYAVSSDQEGENDSHYVTSFKTLDGFDYSNIATYDVKRGINGFACNKFDTQIA
TVENIGEFSSIQESCVRLYDVGRRRDDDDEVDEDEDEEMDASDEDDGSNSASDDNNVDDG
DNAGVEENGDDNDQNDRERNDDDDDDDDEDGGDGDDSGDSSDDYDPNVDIHEISDEFSLS
DIDDLEILFS
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggccagtacagaaccaggacaagaagtttcgcaaattttacgacaatgggaagaagaa
catttatcacctaattacgatcctaccaatcatcttcagagattagcagatataatagag
cttgagacagaaaattattacaagatggatccggatccgtttgatgagagacatccttca
cgcactgacccagaatgtaattttggacaaatattgaaagttctcttcagaaaagataat
tttatgacaaagttgataaacgattatttgagggacacatacttttcaagggcaggaata
atcggaaaagatgtgagaaagttgaatatcgctgcctgtcgcgttatgttggatatactt
ccgggattagaaacatctgcggtatttcagccggagatggacggtcttgtcaacagattg
ttctcatgggcggaaaagagcatcgagccgttgcagagttattctaccggtcttctagct
gctgctatggaagttcaagaaattgctactggtttcagagagcaaaattctaggatgata
ccgctcatgttgcagcgattgcacaagctgcagcaaaaagcgcaggaagatcgtcagcaa
aaaccgcacgaggatcgtcaaatcatcaatgctagaccgtttgctcattttgcacgagac
aggaacaacgttatcgatatcgatgatacgagcggtggtactctgaagcgcaagacgcct
gataaacgtcgagagaacggaacgactcgagaatcgaaagaattctctcctaatgacgac
gatgattctatatgttgtaattccgatgacgcaccgacgagcaagaagagaaaaaacgat
agtacggaaagcacacctgtgaaaaataacgagctttatcctgaaattatgtctccgcct
ttgtccattcccaaaatcgcaaacagttcgcaatttaaatctggatgtaaatctggtttg
tgttcaatttctagcgggacgcatttgacggcgatggaaggaaattccaactcgtcctgg
gctgagatggagtcctatgtcattggtaatattcaaatgtatcctcctaccctcgctact
cgtcaaatgctcattttgcgttatctaacgcctatgggagagtatcaagaattcctcgcc
catgtgttcgagcggaacgctctggatttgatactcaagtatatcaatgttcgagaaacc
aaagacagcagactcgctttcgaggctctcaaatatctcgcgtctctgctttgtcataag
aaattctccatcgaatttctcaatgtcggaggtttgcaaagattgttggacgtgccaaga
ccgagtgtcgcggcgaccggcgtctctatatgtctctactatctcgcatactgcgaagat
gctatggaacgagtttgtctgctgccgaaacatgtgatttcggaccttgtgacttacgcg
ttatggctgttggaacgtagtcacgattccggacgatgccacgcgactatgttcttcggc
ttttcttttccattcaaaattatattggaagaattcgatgcgcaagatggcttgagaaaa
ctatttaatgtgatatctactttgccgattctaaatattgaagaagatgcgactatcaat
gacgatgaggaatgcgcgtcgaagcagatcgtacggcacgttgctgttgctttgaaaaga
tacatggaagcgcatttgcatttgaaggcggaacaattgcaacgcgcggaaaacgtcaga
actgaacgcgccgacgcagcgtggcagccttcgataccaccttacaaggcgtgtaagctc
agcagcgaagaggttcaagcgaaagtcgagattcttcatgatttcatgtctgttagatca
gaatggccgcctgtggaagaactttatcgtttgggtggcattactttgttgttacaaatc
atagcttttgttcgcgagtggaactttactggacggatgatgcataccacttccagcgcg
gagacagttagatcgtgtttggacgtgattgcgatttgttctgttgtgcccaaagttatg
ttgctgctgtgcgaaagaatcgatatgccagacatgaccatgacaacggctattaatctt
tttctagcggctgctgaatgcgaaattatcgccgatgccgatgtacagagagcggcactc
agagctatcgttaattgcgtatgtgctcctatcgcgagggttggaggaagcgtagccaga
tattccgttactggatctgctaaaaaaaaaactactgttcacaatagcgaggaattgata
cagaaagtgtgggagtgtgtgcgatcgaataatggaataatggtattgctgcaattaatg
acggtgaaaacacctatcaccgatgctgatagtattcgagcgttagcgtgccgcgcatta
gccgggctagcgcgcagcgaaaaagttcgacagattattagcaaattaccgatgttcacc
gatggacagattcaatctcttatgaaagatcctatattgcaagaaaaacgacaggaacac
gttactttccagaaatacgctctcgaattggtggaaagggtgtctggtaaagcgaaaccc
ggtgcgaaaacaggtgcggaatacgaagtttctttggtcagcttgcacagggcaaatgtt
gtagcacaaacaaggatacagtacaatgaacaacaacttaatcaattaatatatcaacat
cttatgtcaaaaggtttaaccgaaacggctaatacattgcacagagaaggtaatttggat
tccgctgcggcgattatgagatcaacgacaacgtatcaaccttttatgtatagaaatcct
gcaaatataactccgagaaatggtttttctctagctgcttttgtcaatttatacaatagc
gttagatgtgtgccaagagaagctgcgttgaatagttgtcgaaacaataccgctactccc
acatcgtctcgatttgttgtatcccatacaacaagtacgtgttccgcttcttcgccagct
gtgaacagtaacatccgtttgaagctcgctgattgtctgaatcaaagtggcgtctcgaat
aatgtgaatcaaccgattaaactgcaaatcaatcagaaaaaatcaatatccatcgacaga
caatcacctttggtcgcctcaacttgtcagtctacgacccaatccacttgtaaatcttta
cagaaacagatttctagagatcccggaggtggcggagggcctggtgtagtgcccacttcc
aatgtatccggtgtagttgctcccaatattactctcgattctattattaccgaatatttg
actaatcaacatgctctgtgcaagcatcctatggtaacatgtccacagtttaatcttttt
gaacctcacaaatgtccagatccgtgtacaaaaaattcctcgtctcagaatataacggtg
agattaacaaggcgagtattaggtatggatagcagaaaattggatagaagatatatctac
agccgtttctgtcctgtaaaaacttttcgacctactgaagtaggaggaatatttacttgt
tgtactttctcgccttgcacgcaatatctcattttgggcacccattcgggagacatcaaa
atgttcaatgtccatacaggaatggaagaagcgacttatcagtgtcatgaatcgtatgta
taccatacagaatgtaacaagcgtggcaatcttttgttgacctcgacgacttggagaaat
cctatgtcagcactttgggatataggttcattttttgaaatgaagctcggtttcgagaac
gaggagtatgttgaattcagcaaattacaggacagaataatcggcacgcaaggagaaggc
gcaacgatatatgatatagcaaccgcaaaattattattaacattatcaccttccatttcc
aatcaatatacaaaaaaccgagcaacctttagtatgaatgacgagttggtgcttagcgat
ggtatattgtgggatgttaattcaggcaaagaaattcataaatttgacaaattgaatcaa
acattaaatggagtttttcatccaaacggtactgaaattgtgtccaataccgaagtgtgg
gatttaagaacctttcacttgctcaaaacagttcccactcttgatgaaatggaagttatc
ttttcaccggttaataatattatttatgcagtttcgtcggatcaagagggtgaaaatgat
tcacattatgtaacttcattcaagactctggatggttttgattacagcaatattgcaact
tacgatgttaaaagaggaattaatggatttgcatgtaacaaatttgacactcaaattgct
acggtggaaaatataggtgaattttcaagtatacaagaatcgtgtgttagattatacgat
gttggaagaagaagagacgatgacgacgaagtcgacgaagatgaagatgaagaaatggat
gccagtgatgaagatgatggttcaaattctgcatcagatgataataatgtagacgatggc
gataatgcaggtgtagaagaaaatggcgatgataacgatcaaaacgacagagaacgtaat
gatgacgatgatgatgacgacgacgaagacggtggcgatggagacgattctggcgacagc
agtgacgattacgatcctaatgtcgatattcacgagatttccgatgaattttccttatcg
gacatagatgatttggaaatattgttttcgtga
DBGET
integrated database retrieval system
