Pseudochaenichthys georgianus (South Georgia icefish): 117444243
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Entry
117444243 CDS
T09629
Name
(RefSeq) vascular cell adhesion protein 1-like isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117444243
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pgeo04090
]
117444243
04091 Lectins [BR:
pgeo04091
]
117444243
CD molecules [BR:
pgeo04090
]
Proteins
117444243
Lectins [BR:
pgeo04091
]
I-type lectins (Siglecs)
117444243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
ICAM1_3_5_D2
Ig_C17orf99
Izumo-Ig
Adhes-Ig_like
REJ
Motif
Other DBs
NCBI-GeneID:
117444243
NCBI-ProteinID:
XP_033935788
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MSPLCVCRISALSAVLLLLLTSWYVQGLLQVDVLPRRPLIRLGQWQQLFCRVQGCPTMPT
VSWSWLDDRPLAASVQSNQSGSSVTFDPVRMHHEGALLCRVRCGEESGKSLSTLHLYSFP
SAPLIGGQEWLRLGAESVLTCQVSGVYPPEQLTLSWLQGGSVLQSTRATERSEYRFKPQE
QDRGQSLICRATLDLKDLPTEDQTRETEVLLDPLFAPVVTEISSSALLMVGAPFVLSCSA
RGNPEPQISWSFRSAGGQVEAGRASDRLEIAQVRLSDAGRYDCEARNSEGNHSASVEVRV
HAPPTNTSLSVSPGEQVLEGQQVTFTCQSDGAPPPTLVLRREGEELQRTDSASSSSLSFS
LSSASLQDSASYLCEASNQYGAHLVNRAITVTAHPLQVDLSPLVPAADRGSDLLLTCRAS
GCLLPPTFTWRRTDQNHTLLQGSHQNQNHTLLQGSHQNQNHTLLQGSHQNQSLLLLQDVD
LQDQGGYSCEAECDSVIRTAEIQLHVFSFPSDPVLEAPGPVLLGQEAVLRCNVTNVFSAN
QMRILWLSGNRTLLSESLRFSGSLQNVSSVLQYQVQEDQPVLVCRAELLREDGDVWRSRR
TSVALKVHYPPRGTSLSVSPGEQVLEGQQVTFTCQSDGDPPPTLVLMREGEEVQRTDSAS
SSLSFSLSSARLQDSASYLCEASNQYEAQVMTRSITVTAPPRNTSVLVLPSTVVQEGQTI
TVSCHTVCFPPAAVSLKNLANGTELYSSNGTFLLVNVTARDSGMYQVNVTNELGFQVRVF
SIRVRERSSSPPSLGSILIPVLCSAVGLAAAALLLDLLRRSRKKGFYQLPQTAPPSA
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgtctccactgtgtgtctgcaggatctctgctctctccgctgtgctgctgctgctgctg
acgtcgtggtacgttcagggactcctccaggtggacgtgttacccagaaggcctctcatc
aggctcgggcagtggcagcagctgttctgccgggtgcagggatgtcccacaatgccgacc
gtgtcgtggtcgtggctggacgaccggcccctcgcagcctcagtgcaatccaatcagagc
ggctcctcagtgacctttgaccccgtcaggatgcaccacgaaggagccctgctgtgccgg
gtccgctgcggggaggaaagcgggaagagcctcagcaccctgcacctctactccttccca
tcggcccctctgattggtggtcaggagtggctcaggttgggggcggagtctgtgctcacc
tgtcaggtgtctggtgtgtacccccccgagcagctgacgctcagctggctgcagggaggc
tccgtgctgcagagcaccagggccacggagcgctcagagtaccggttcaagccccaggag
caggaccgggggcagagcctgatctgcagggcgacgctggacctgaaggacctgccgacg
gaggaccagacccgagagactgaggttctgctggacccgctcttcgctcctgtggtgacg
gagatctcctcctctgctctgctgatggtcggcgctccgttcgtcctctcctgctccgcg
aggggaaacccggagccgcagatcagctggagcttcaggtctgcaggcggacaggtggag
gcgggcagagcctctgataggctggagatcgctcaggtgaggctgagcgacgccggacgc
tacgactgcgaggcgaggaacagcgaggggaatcacagcgccagcgtggaggtcagagtg
catgccccccccaccaacacctccctgtcagtgagtccaggtgagcaggtgctggagggg
cagcaggtgacctttacctgccaatcagacggagccccgccccccacgctggtgctgagg
agggagggggaggagcttcagaggacagactccgcctcctcctcctctctctccttcagc
ctctcctccgcctcgctgcaggactccgcctcctacctgtgtgaagcatccaatcagtac
ggagctcacctggtgaaccgagccatcaccgtcacagctcaccccctgcaggtggatctg
agtcccctggtccctgcagcagatcggggttcagatctgctgctcacctgccgggcctct
gggtgtctcctcccacccaccttcacctggaggaggactgaccagaaccacaccctgctc
caggggtcccaccagaaccagaaccacaccctgctccaggggtcccaccagaaccagaac
cacaccctgctccaggggtcccaccagaaccagtccctgctcctcctgcaggatgtggac
ctccaggatcagggagggtacagctgtgaggccgagtgcgactctgtgatccggaccgct
gagatccagctccacgtcttctcgtttccgtccgatccggttctggaagctcccggtccg
gtccttctgggtcaagaggcggtccttcgttgtaacgtcaccaacgtgttctcagccaat
cagatgaggatcctgtggttgtctggcaacaggacgctgttgtccgagtcgctcaggttc
tccggttccttacagaacgtctcgtccgttcttcagtaccaggtccaggaggatcagccg
gttctggtctgcagggcggagctgctgagggaggacggagatgtgtggaggtccaggagg
acgagtgtagctctaaaggttcactatcctccgaggggaacctccctgtcagtgagtcca
ggtgagcaggtgctggaggggcagcaggtgacctttacctgccaatcagacggagacccg
ccccccacgctggtgttgatgagggagggggaggaagttcagaggacagactccgcctcc
tcctctctctccttcagcctctcctctgcccggctgcaggactccgcctcctacctgtgt
gaagcatccaatcagtacgaagcacaagtgatgacccgatccatcaccgtcacagcgccc
cccaggaacacctcggtgctggtcctgccctctacggtggtccaggagggacaaaccatc
accgtctcctgccacaccgtctgcttcccgcccgccgccgtcagtctgaagaacctggcc
aatgggacggagctatactcgtccaacggcaccttcctattggtcaacgtgacggccaga
gactcggggatgtaccaggtcaacgtgaccaacgagctggggttccaggtccgagtgttc
agcatccgggtcagagaaaggagctccagtcctcccagtctcggcagcattctcatccca
gtcctctgctccgccgttgggctcgccgccgccgctctgctcctcgacttgctgaggaga
tccaggaagaaaggtttctatcagctgccgcaaactgccccgccgtcagcctga
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