Pseudochaenichthys georgianus (South Georgia icefish): 117445913
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Entry
117445913 CDS
T09629
Symbol
grin2bb
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04020
Calcium signaling pathway
pgeo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117445913 (grin2bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117445913 (grin2bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117445913 (grin2bb)
Ion channels [BR:
pgeo04040
]
Ligand-gated channels
Glutamate (ionotropic)
117445913 (grin2bb)
BRITE hierarchy
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
117445913
NCBI-ProteinID:
XP_033937752
EnsemblRapid:
ENSPGEG00000025062
LinkDB
All DBs
Position
1:complement(28448085..28607467)
Genome browser
AA seq
1750 aa
AA seq
DB search
MFKGRHLHSFTMLVSLHPSSSRLQDKHFVSPPSSTPLPPHPDQSSHHPYPQPRLTLPFLS
WSFSLLLFSILLLPVCESRRGGGPGSGPGGAQGGGGGQRGGGTQRGVVIPPQYSPAIPGL
PPINPKLINSLSIAVILVGNSSEVTLGAGLEKEDFLHIPYPPKVEVVTMNETDPKSIINR
ICAQMTRNSLQGVVFGDDTDQEAIAQILDFISAQTHIPILGIRGGSSMVMAAKDDNSMFF
QFGPSIEQQASVMLNIMEEYDWYIFSIVTTYYPGYQDFVNKVRSTIDNSFVGWELEEVFL
LDMSLEDGDSKIQNQLKKLQSPVILLYCTKEEASTIFEVAHSVGLTGYGFTWIVPSLVAG
DADIIPNVFPTGLISVSYDEWDYNIEARVRDAVAVIATATSTMMLDRGPHTLQKSSCLGT
PDKKGSNTGHSKEILKYLMNVTFEGRNLSFSEKGHQMFPKLVIILLDKDRQWDRVGKWER
GSLTMRYHVWPRFEEEREDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKLTNQ
TGDSGIYIKRCCKGFCIDILKKIAKAVKFTYDLYLVTNGKHGKKVNGTWNGMVGEVVLKN
AHMAVGSLTINEERSQVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVM
LLLVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKG
TTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQNPNEFSPPFRFGT
VPNGSTERNIRNNYRDMHTYMTSFHQKNVDEALYSLKSGKLDAFIYDAAVLNYMAGRDEG
CKLVTIGSGKVFASTGYGIAIQKDSGWKRAVDLAILMLFGDGDMEEFEALWLTGICHNEK
NEVMSSQLDVDNMAGVFYMLGAAMILSLLTFICEHWFYWQLRFCFMGVCTGQPAATFTIS
RGIWSCIHGVQIEENKSTIDSPSATMKKNMNNTHSNILRLLRTAKDMTAVPGVNGSPHPA
LEYSHSARESTIYDIQEHRRSLVGHPADCKTAPPYLPEDNMFSDYISEVERTFGNLPLKD
SNLYQDHYLHHHPASALGMSGPVPNRPRSLGSTSSLEGGMFDCDSLGGGVAPIFTTQPRP
SMTHRNTNKFDLIAGHAPADSDQGGFKGNNVYGRFSFKGGASSTGLIGGHDRYCGGGGAG
SGGDDGNIRSDVSDISTHTVTYGNLEGNNKRRKQYRDSLKKRPASAKCRREQDEIELSGL
RRRAHHHTVHHHFPHGPQAHRTVSPPLERKRGGGGGNSSPFVFRKEKEDLRDFYADQFRS
KEGKAQWEHEGGSGGSGVGGGSGGGICKSLVPVEDFLKGKGKKPECKGGLGTVSAGQQAH
TCWEKGVSGLGGGGIAGGDWECRNSHNVCHHGGGGACPANGVGGSSSRPSSASCKRGDSC
KVPPGNLYNISEDNNMVFAAGKSSVGPAQPQTQAQRRKLGPGGRVLRRQHSYDTFVDLQR
EGAGRMGGVGKGVGGPYAQPRSVSLKDKDRSMEGPSPYAHMFERYAGERESSMFGGIGGD
RAKGGSSFSLFREGGLHQRSVGERDLRDRDRAISGGGGGGSSSRGAGTYSLSKSLYPDKV
NQNPFIPTFDDDQCLLHGGKPYYIKKPQTQQQQQQLLNNSRGGGDFRGSMGTTSYLPASA
TAGVMSNVAPRFPNDLCLGGVGGPMGNHHGASKLMPVARDTLGLGPGHRPFNGASNGHVY
EKLSSIESDV
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagggacggcatttacactccttcacaatgcttgtcagcctccacccttcttcc
tcccgtcttcaggacaagcactttgtctcccccccttcctccacccccctccctcctcac
ccagaccagtcctctcatcatccttatccccagcctcggctgaccctgcccttcctctcc
tggtccttctctctgctcctcttctccattctcctgctacccgtctgcgagtcccgcagg
ggtggaggtccaggttcggggcctggaggtgcccaaggggggggaggtggccagagggga
ggcggcacccagagaggggtagtcatcccgcctcaatactctccagcgataccgggtctt
ccccccatcaaccccaaactgatcaactctctcagcatagcggtcatcctggtgggaaac
tctagtgaagtaactctgggggcgggacttgagaaagaggacttcctgcacatcccttac
cctcccaaagtggaggtggtcaccatgaacgagaccgaccccaagagcatcatcaatcgg
atctgtgctcagatgacgaggaactctctgcagggcgtggtgttcggtgacgacacggac
caggaggccatcgctcagatcctcgacttcatctcggcccagacacacatccccatcctg
ggcatccgcgggggctcctccatggtcatggctgccaaggacgacaactccatgtttttc
cagttcggtccgtccatcgagcagcaggcctccgtcatgttgaacatcatggaggagtat
gactggtacatcttctccattgtcaccacgtactaccctggctaccaggactttgtcaac
aaggtccgaagcaccatcgataacagctttgtgggctgggagctggaagaagtcttcttg
ctggacatgtcattggaagacggagactccaagatccagaaccagctgaaaaaactgcag
agtccggtgatcctactctactgcaccaaggaggaggccagcaccatcttcgaggtggct
cactctgtgggcctcacagggtacggcttcacctggatcgtgccctcgctggttgctgga
gacgcagacatcatccccaacgtcttccccacagggcttatctctgtatcatatgacgaa
tgggactacaacatcgaggccagggtacgtgatgcagtggctgtcatcgccacggcgacc
tccaccatgatgctggaccgggggccgcacaccctgcagaagtccagctgcctcgggact
ccggacaaaaagggctccaacactggccactccaaggaaatactgaagtacctcatgaat
gtgacatttgaaggcagaaacctgtcatttagcgaaaagggtcaccagatgtttcccaaa
ctggtcatcattcttctcgacaaggacagacaatgggacagggttggcaagtgggagaga
ggctccctgacgatgaggtaccatgtgtggcctcgctttgaggaggagcgggaggaccac
ctgtccatcgtgactctggaggaggcgccgtttgtgattgtagaggacgtggacccgctc
agtgggacctgcatgaggaacactgtgccgtgccgaaaacagctaaaactaaccaatcag
acgggggattcggggatttacatcaagcgctgctgcaaaggtttctgtatcgacatcctg
aagaagatcgccaaggcggtcaagttcacctacgacctctacctggtcaccaacggcaaa
catggcaagaaggttaatgggacatggaatggcatggttggggaggtggtgttgaagaat
gctcacatggcagtgggttcgctcactattaacgaggagaggtcacaggtcatcgacttc
tctgtgcctttcattgagacgggcatcagtgtcatggtctcccgtagcaacggcactgtg
tccccctccgcctttctcgagcccttcagtgctgatgtctgggtgatgatgtttgtgatg
ttgctgttggtgtcggccgtggctgtgtttgtgtttgaatatttcagcccagtgggttac
aatcgctgcctggcagatgggcgagagcccggcggtccctccttcaccatcggaaaggcc
atctggttgctatggggtctggttttcaacaactctgtccctgtgcagaaccccaaaggt
accaccagtaagatcatggtgtcagtgtgggccttcttcgctgtcatcttcctggcctcc
tacactgccaacctggccgccttcatgatccaagaggagtatgtggaccaggtgtcgggc
ctgtcagataaaaagttccagaatccaaacgaattctcaccgccgttccggttcggcacg
gtgcccaacgggagcacagagcgcaacatccgcaacaactaccgggacatgcacacttac
atgaccagcttccaccagaagaacgtagacgaagcgctgtacagtctgaagagcggcaaa
ctggatgccttcatctacgacgctgcggtgctgaactacatggcgggccgagacgaaggc
tgtaaactggtcaccatcggcagcggcaaggtgttcgcctccaccggctacggcatcgcc
atccagaaagactccggctggaaacgagccgtggatctggccatcctcatgctgtttgga
gacggtgacatggaggagttcgaggctctgtggctgacgggcatctgccacaatgagaag
aacgaggtgatgagcagccagctggacgtggacaacatggcgggcgtcttctacatgctc
ggggccgccatgattctgtcattactcactttcatctgtgaacattggttctactggcag
ctgcgtttctgcttcatgggcgtgtgcacgggacagcccgcggccaccttcaccattagc
agaggtatctggagctgcatccatggggtacaaattgaggaaaacaagtcaaccattgac
tcgccctcggccaccatgaagaagaacatgaacaacacccactccaacatcctgcggctc
ctccgcacggctaaggacatgactgccgtcccgggcgttaacggctctccgcacccggcg
ctggagtacagccacagcgcgcgtgaatcgactatctatgatatccaggagcaccggcgc
agcttggtaggtcaccctgccgactgcaagacagcgcctccctacctgccagaggacaac
atgttcagtgactacatcagcgaggtggagaggacttttgggaacttgcccctgaaggac
agcaacctgtaccaggaccattacctgcaccaccacccggcctcggctctgggtatgtcc
ggccccgtgcccaacaggccgcgtagcttaggcagcactagctcgttggaaggtggcatg
tttgattgcgacagtttagggggaggggtagcgcccatcttcaccacccagccccgcccc
tccatgactcacaggaataccaataagtttgacctgattgccggccacgcccctgcggac
tccgaccagggtgggttcaaggggaacaatgtgtacgggaggttttctttcaaaggaggc
gcatccagcacagggctcatcgggggtcatgaccggtactgtggtgggggtggggcaggc
tcagggggggatgatgggaacattcgctcagacgtttcggatatctcaacgcacactgtc
acctacggcaacctggagggaaacaacaagcggcgtaagcagtacagggacagcctgaaa
aagaggccagcttcggccaagtgcagacgggagcaggacgagatagagctgagcggcctc
aggaggagagcccaccaccacaccgtccaccaccacttcccccacgggcctcaggcacac
cgcacggtctcacctcccctggagcggaagaggggaggaggagggggtaattcttcacct
ttcgtattccgcaaagaaaaggaggacctgagggatttctatgcggaccagttccgctcc
aaggagggcaaggcccagtgggagcacgagggtggaagtggaggaagcggtgtgggcggt
ggtagtggtggtggtatctgtaagagcttagttcctgtagaagacttcctcaaaggtaaa
ggcaagaagccggagtgtaaaggtgggctcggcacagtgtcggcagggcagcaggcccac
acctgctgggagaagggggtctctgggctaggaggggggggcatagcagggggtgactgg
gagtgtcgtaatagccacaatgtgtgtcaccacggagggggtggcgcttgcccggctaac
ggggttggggggagcagcagtcgccccagctccgctagctgcaaacgcggcgactcctgt
aaggtcccgccgggaaacctttacaacatcagcgaggacaacaacatggtgttcgctgca
gggaagagtagcgtgggaccggcccaacctcaaactcaggcgcagcgcaggaagctaggg
ccaggggggagggtgttacggaggcagcactcatatgacacatttgtggacctgcagagg
gagggggcgggtcgcatgggaggggttggcaaaggcgttggggggccttatgcccagccc
cggagtgtgagcctaaaagacaaagatcgctccatggagggccccagcccttacgctcac
atgtttgagaggtatgcaggggaaagggagtcctccatgttcggaggaataggcggggat
agggcgaagggaggctcctccttcagcttgttccgagaaggtgggttgcatcagcggtcg
gtgggggagagagacctgagggacagagatagagctatttcaggaggtggtggtggtggc
agcagcagcagaggggccgggacttactccttgtctaaatctctctacccagataaggtg
aaccagaaccccttcatcccaaccttcgacgacgaccagtgtctattacacggcggcaaa
ccgtactacatcaaaaagccacagacgcagcaacagcagcagcaacttctcaacaacagc
cggggaggaggggacttccgcggctccatgggaacgacttcctatttgcccgcgtccgcc
acagctggggtgatgtccaatgtggcccccaggttccccaacgatctgtgtctgggcggg
gtaggggggcccatggggaaccaccacggggccagcaagctaatgcctgtggccagggac
actttgggtttggggccggggcatagacccttcaacggtgccagcaatggacacgtttat
gaaaagctctccagcattgagtcagacgtctga
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integrated database retrieval system
