Pseudochaenichthys georgianus (South Georgia icefish): 117447525
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Entry
117447525 CDS
T09629
Symbol
glb1
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00052
Galactose metabolism
pgeo00511
Other glycan degradation
pgeo00531
Glycosaminoglycan degradation
pgeo00600
Sphingolipid metabolism
pgeo00604
Glycosphingolipid biosynthesis - ganglio series
pgeo01100
Metabolic pathways
pgeo04142
Lysosome
Module
pgeo_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
117447525 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
117447525 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
117447525 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
117447525 (glb1)
00511 Other glycan degradation
117447525 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117447525 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117447525 (glb1)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
117447525 (glb1)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117447525 (glb1)
BRITE hierarchy
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
117447525
NCBI-ProteinID:
XP_033940130
EnsemblRapid:
ENSPGEG00000022438
LinkDB
All DBs
Position
1:complement(32949310..32959412)
Genome browser
AA seq
637 aa
AA seq
DB search
MALLGFGNILLLLLLFGNSLGAPGSFSVDYKKDCFRKDGEEFRFISGSIHYSRIPRVYWK
DRLLKMYMAGLNAIQTYIPWNYHEESPGQYSFSGERDMEYFLQLAQDIGLMVILRPGPYI
CGEWDMGGLPAWLLNKKDIVLRSSDPDYIAAVDKWMGKLLPMIKPYLYQNGGPIITVQVE
NEYGSYFACDYNYMRHLTKLFRSHLGEEVVLFTTDGAGLQFLKCGSIQGVYATVDFGPGN
VTAAFNAQRHAEPHGPLVNSEYYTGWLDHWGSPHFVVSSTAVAKSLNEMLAMGANVNMYM
FIGGTNFGYWNGANSPYGPQPTSYDYDAPLSEAGDLTKKYFAIRDVIKMYRKIPEGPIPP
TTPKYGYGTVGMKRLQTISDALEMLSFSGPVKSIYPQTFIELNQAFGYVLYRTKLPVNCN
TPTPLSSPLNGVHDRAYVSVDGVAVGIIERNKALTVNVTGKDGSQVDILVENMGRINYGR
DINDFKGLVSNLTLGKDTLNGWTMYSLSIDEAVSQGLLGETKPTVPSPPAALSLPTFYEG
SFIIPDGIPDLPQDTYIKLPKWRKGQVWINGFNLGRYWPSRGPQVTLYVPASILSNTVPN
NVTVLELEDAPCGPGPCSVEFTDTPILNGPVQSDFKQ
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggccctgctcggatttggaaacatactgctgctacttctgctttttggaaattcactc
ggggcacctggttcattcagcgtggattacaagaaggactgcttccgaaaagatggggaa
gagtttcgttttatatcaggaagcatccattacagccggatccccagagtctactggaag
gaccgactgctcaagatgtacatggcaggactgaatgccatccagacgtacattccctgg
aactaccacgaggagtctccaggccagtacagttttagtggagagcgggatatggagtat
ttccttcagctggcccaagatattggcttaatggtgatccttcggcctggaccctacata
tgtggagagtgggacatgggagggctgcctgcctggcttctcaacaagaaagacatcgtg
ctgcggtcgtcagatccagattacatcgcggcagtagataagtggatgggaaagttactg
cccatgataaagccatatctctaccagaacggaggtcctatcatcactgtacaggtggag
aatgaatatggcagttatttcgcctgtgactacaactacatgcgtcacctgactaagctt
ttccggtcccacttgggcgaggaggtggtgctcttcaccacagatggagctggactccaa
ttcctcaagtgtggctcaatacaaggcgtctacgccactgtggactttggcccaggtaat
gtaacggctgcttttaatgcacagagacacgcagaacctcatggacctttggtgaactct
gagtattacactggctggctggaccactgggggtctcctcactttgttgtgtcatccacc
gctgtggccaagtccctcaatgagatgctggccatgggagcaaacgtcaacatgtacatg
ttcataggagggacaaactttggatactggaatggcgccaactcaccgtacggcccgcag
cccacgagctacgactacgacgcgcctctctctgaagcaggagacctcacaaagaagtac
tttgctattcgtgatgtcataaaaatgtaccgtaagataccagagggaccgataccacct
acaactccaaagtatggatatgggactgttgggatgaaaaggctccaaacaatttcagat
gccttagaaatgctttctttctccggccctgtcaaaagcatttatcctcagactttcatc
gaactgaaccaggcctttggttatgtgctatacaggactaaacttcctgttaactgcaac
acacccacaccactgtcgtctcctctgaacggcgtccatgacagagcgtatgtgtcagtg
gacggggtggctgtggggattattgaaaggaacaaggccttaactgtcaatgtgactggg
aaagacggcagtcaggtggacatactggtggagaatatgggccgaatcaactacggaaga
gacatcaatgactttaagggcctggtgtccaacctgactctggggaaagacacgctcaat
ggctggacgatgtacagcctcagcatcgatgaagcggtcagtcagggcctcctcggtgaa
accaaaccaacagtcccatctccccccgctgctctctccctccccaccttctacgaggga
agcttcatcattcctgacggcatcccagacctcccccaggacacctacatcaagctgccc
aaatggaggaaggggcaagtttggattaacggcttcaacctgggacgctactggccgtct
cggggccctcaggtgacactttatgttcctgcctccatcctcagcaacactgtacccaac
aacgtgactgtgctggagctggaggacgccccctgcggccccgggccctgcagcgtggaa
tttaccgacacccccatcctgaatggcccagtacagtctgacttcaaacagtag
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