Pseudochaenichthys georgianus (South Georgia icefish): 117449298
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Entry
117449298 CDS
T09629
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00310
Lysine degradation
pgeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117449298 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117449298 (prdm2a)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117449298 (prdm2a)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
117449298 (prdm2a)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117449298 (prdm2a)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117449298 (prdm2a)
BRITE hierarchy
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2HE
zf-C2H2_3rep
zf-C2H2_11
zf-C2H2_6
zf-C2H2_8
YjdM_Zn_Ribbon
zf-BED
Motif
Other DBs
NCBI-GeneID:
117449298
NCBI-ProteinID:
XP_033942778
LinkDB
All DBs
Position
7:24936478..24945555
Genome browser
AA seq
1383 aa
AA seq
DB search
MKDVTTVKDPVRQTSFRELYTTSTKMEDSPHLYISEFVENEDMDKMDINQEETNIASDMV
KSPYQDTERDSNFFQCQHCERHFTTKPGLERHMHIHTSANNDAHKYKTNISLASNLELLH
HEKVKPLDLAGSAMQLHTSSTTGSNTPILSSGDHNAQPDKPGVSEGRHACKYCGKIFTTH
TNTWRHERRIHEQHLQVTHVEKAHLPQEENVEGMCSETNQQETELVDKMAPAAVLENEVG
HAEQYMLDISSNISENLSFYIDGRIVSTSTISSCEAAEVHSGSATLVGLDALILDPTQIS
QVLNTDSEMSGQPLARRRTATPPLLPQIKTELESDVVVSSSSSSLVCSIIENLFPQNTEG
TVVQKERTVFLSPKLKQLLEKQDGLKLALIADGQKPLSPVSLSVLPAGTGRFKRRTGSPP
PSSPQQSPREETADSGDCEAVNTGQTETQHSSPAHQTANVKDDTTPPEEEPPTESWPPST
GGNSCNQQPLDLSNTVKSSEDVASADSALDLSFQKTNHGESELMLNLVSHAVLTEGKSIE
GMMGMTLIDSLEQNISFMNPDTSLLTDFTILTSQDMMSPMQSMAEGLVYGLALPSNSLTP
SPSLTPLSLQPSSPCTIAFTTHASHTGLSTAPSLITVLAPSHISNQPIQVLAPDISQVTC
TENALHFSECDLTTAFATSNAADPVTLSQPFHPTLNLPSHMFLSDQITLNPPILESTPTS
EGQFTPTVTFNDSLINSYNLTSNTVLIECTIALEAPGSIVPAAVTLQGNTAEPPAPTQMV
VNHVEQEQIVSVPNPQTEDPTILMSSIAESVTLSTTAASVLSDCPAPVGESGPDPELVVN
AEPSTIKEEEAADSTVSAPETPSKTSPSSEKAEEEDASTTPSDAQQQTFTKNFICNVCDK
LFHSMKELGHHVGDHADEWPYKCEFCVLLFSKPSALLDHRSSLHGVGKTYVCSACTKEFV
YLCNLKQHQEELHPGQQCTYTEEEKGKLRPQNFNNLTKVTTETSVPDAAEEPKVKKEEGE
VDEAAEELLTTIKILASDGAKLKGPDVRLGINQHYPSYKPPPFPYHNRSTTGTLASATNF
TTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILTCANASDKRRYTPKRNPIPLRHFAKTQ
NGVLSTTNSTNGLNASNRPSHSNRSKPNQDSAVNVKFKVLSKRKKKLVQRVMPQRNKSVP
SSNKMSPAHVDEQQEIFVCPHCSREFTMRRSRTKHMAVCPKKPKEVKKRKEGGISVTKEN
DGHLHRGAEETQQSSPLHKTRLQTSSPAKRPAILPVQTVLSNKRSKIIIKESTQLKQDTP
TLSELPIVRTFNPSMRQYSRMQHKGMPIKITIVKPQQAAAQREERPPTPGPEDSSSSEHS
PAV
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgtgacaactgtaaaagatcctgtgcgacaaacttccttcagagagctgtat
acaacctccacaaagatggaggactctcctcacctatacatctcagaatttgtagagaat
gaggacatggataagatggacattaatcaagaggaaaccaatattgcatccgacatggtt
aagtcaccataccaggacactgagagggactcaaacttttttcaatgccagcactgtgag
agacacttcaccaccaaaccaggcctggaacgacacatgcacatccacacctccgcaaac
aacgatgctcacaaatacaaaaccaatatttcactagcttcgaatctggagctgttgcac
catgagaaggtaaagcctctggatttagcaggctcggccatgcagcttcatacttcatcc
accactggctctaatactcccattttgtcctctggtgaccacaacgctcagccagacaaa
ccgggagtgtcagaggggcgtcatgcttgcaagtactgtggaaagatattcactacacat
accaacacgtggcggcatgagcgaaggatccacgagcagcacctgcaagtcacacatgtg
gaaaaagcccatctgccccaagaggaaaacgttgaggggatgtgcagtgaaacaaaccaa
caggaaactgagcttgttgacaaaatggcacctgcagctgttctggagaacgaagtggga
cacgcagaacaatacatgcttgacatctctagcaatatttcagagaatcttagcttttat
attgatggaaggatagtgtcaacaagtacgatcagtagctgtgaagcagctgaggttcat
tctgggtcggcaactttagttggactggacgccctgattctagaccccacccaaatcagc
caggtgttaaatacagattcagagatgtctggtcaaccactggcaaggagaagaaccgcc
acacctccgcttttaccacaaattaaaactgaactggagtctgacgtggttgtgtcttct
tcctcatcttcacttgtatgttctataatagagaatctttttcctcagaatacagagggt
acagtggtgcagaaggaaagaactgtgtttctgtctccaaagctgaagcagctgctggag
aagcaggatggccttaaactcgcactcatcgcagacggccagaaacctttatcacctgtc
tctctgtctgtgctgcctgcagggacaggacggttcaaaagaaggactgggtctcctcca
ccgagctctccacagcaaagccctagagaagaaacggcagatagtggagattgtgaagct
gtgaatacaggacagacggagacccaacatagttcacctgcgcaccaaacagccaatgtg
aaggatgacacaaccccacctgaggaggagccaccgacggagagctggcctccctccacc
ggtggtaattcctgtaaccagcaaccactggatctctccaacacagtcaaaagcagtgaa
gacgtagcttcagccgattcggcgctggatttgagtttccaaaaaacaaatcatggggaa
tctgaactgatgttaaatttagtttcacatgcagttttaaccgaaggaaaatcaattgaa
ggcatgatgggaatgaccttaatcgatagtttagagcaaaatataagcttcatgaatccc
gacacctccttactgacagacttcaccatacttacaagtcaagatatgatgagcccaatg
cagtctatggcagaagggcttgtttatggtcttgcacttccctccaattccctgactcca
tcaccctccctgacccctctctccttgcagccatcttcaccgtgcaccatagcattcacc
acccatgcttcacacacagggctctccactgctccttcattaatcacagtgttggcaccg
tcacatatttcaaaccaaccaatccaggtattagcccccgatatatcacaggtaacctgc
acggaaaatgcattacatttttcagagtgtgatttaactactgcatttgccacatcaaat
gctgccgaccctgtcactctctcccaaccttttcacccgactctaaatctacccagccac
atgtttctctctgatcaaataacactcaatccgcctatattggagtccactcctacgtca
gaagggcaattcacacctactgtaactttcaatgattccctcatcaactcgtataaccta
accagcaacacggtgttgatagagtgcacaatagctcttgaagccccggggagtatagtc
cctgctgcagtcaccttacaaggaaacactgctgagcctccagcacctacacagatggtt
gttaatcacgtcgaacaggaacagattgtatcagtgcccaacccgcaaactgaagacccc
actattctgatgtcatccatcgcagaatcagttactctatccaccaccgccgcctcagtg
ctatctgattgtcctgctccagttggtgaatcaggtcctgacccagagcttgttgttaac
gcggagccatcgaccatcaaagaggaagaagctgctgacagcactgtttccgctcctgaa
accccatctaaaacctcgccttcttctgagaaagccgaagaggaggacgcctcaacaact
cccagcgatgcccaacagcagactttcaccaagaatttcatctgcaacgtgtgcgataag
cttttccattcaatgaaagaactgggccatcatgtaggtgaccatgctgacgaatggccc
tacaaatgtgagttctgcgtgctgctgttcagcaaaccctccgctttgctcgatcatcgg
tcaagcctccacggggtgggcaagacttatgtttgcagtgcatgcacgaaggaatttgtc
tacctttgcaatctaaaacagcatcaggaagaattacatcccggacagcagtgtacatac
acagaagaggaaaagggaaaactaagacctcagaacttcaataacttaacaaaagtcacc
acggagacctcagtgcccgacgctgcagaggaaccgaaggtgaaaaaggaagaaggggaa
gtagatgaggctgctgaagaactgttaacaactataaaaatcctggcctcagatggagcc
aaactcaaagggccggatgttcgtctcggcatcaaccaacattaccccagctataagccc
cctccgtttccctaccataacaggtccaccacgggcaccttagcttcagccacaaacttc
actacccacaacatcccacaaaccttcagcacggccattcgatgcaccaagtgtgggaag
agctttgataacatgccagagttacataagcacatcctgacttgtgcgaatgccagcgat
aaaaggcgatacacccccaaaaggaatcccatcccactacgccactttgcaaaaactcaa
aatggagttctatctaccactaactccactaacggactaaatgcgtcgaacagacccagc
cattcaaacaggtccaaacctaaccaagattcagcagtaaatgtgaagttcaaggtcctg
agcaagaggaagaaaaagttggtccaaagggtcatgccacagaggaacaagtcagtccct
tcatcgaataaaatgtcacccgcacatgtggatgagcagcaggagatcttcgtctgcccg
cactgcagcagggagttcacaatgcgccgcagcagaaccaaacacatggccgtctgcccc
aagaaacccaaagaggtgaagaaaaggaaagaaggaggcatctctgtgacgaaggagaat
gatggacacctgcacagaggagctgaagagacacaacaatcctcacctctgcataaaacc
agactgcagacgtctagccccgctaaaagacccgccatcctaccagtgcaaaccgtcctg
tcaaacaaaagaagtaaaataattatcaaagagagcacacagctgaaacaagacacgccc
actctgagtgaacttcccatcgttcgcacttttaacccctctatgcgacagtatagccga
atgcagcacaaagggatgcccattaagatcaccatagtgaaaccacagcaggctgcagcg
cagagggaggagcggccccccaccccgggaccagaggacagcagcagctctgagcacagt
ccagcagtctga
DBGET
integrated database retrieval system
